STRINGSTRING
sqstm1 sqstm1 calcoco2 calcoco2 pdik1l pdik1l LOC102199188 LOC102199188 becn1 becn1 tp53inp2 tp53inp2 atg12 atg12 nbr1 nbr1 ambra1 ambra1 LOC102215228 LOC102215228 gabarapl2 gabarapl2 ENSPNYP00000005296 ENSPNYP00000005296 LOC102210230 LOC102210230 pik3c3 pik3c3 bnip3 bnip3 LOC102193458 LOC102193458 LOC102210274 LOC102210274 atg13 atg13 klhl17 klhl17 gabarap gabarap LOC102192858 LOC102192858 STEAP3 STEAP3 ENSPNYP00000011331 ENSPNYP00000011331 wdr45b wdr45b atg14 atg14 steap2 steap2 ulk3 ulk3 ENSPNYP00000012991 ENSPNYP00000012991 atg10 atg10 vmp1 vmp1 wdr45 wdr45 fundc1 fundc1 atg5 atg5 ulk1 ulk1 atg2a atg2a pik3r4 pik3r4 atg9a atg9a rb1cc1 rb1cc1 LOC102192265 LOC102192265 LOC102204541 LOC102204541 tp53inp1 tp53inp1 atg9b atg9b ENSPNYP00000021288 ENSPNYP00000021288 LOC102193827 LOC102193827 LOC102213573 LOC102213573 steap4 steap4 atg4c atg4c wipi2 wipi2 ILRUN ILRUN epg5 epg5 nrbf2 nrbf2 LOC102205676 LOC102205676 atg7 atg7 LOC106455903 LOC106455903 WIPI1 WIPI1 map1lc3a map1lc3a LOC102195676 LOC102195676 tecpr2 tecpr2 LOC102201299 LOC102201299 LOC102192801 LOC102192801 atg4b atg4b LOC102210867 LOC102210867 LOC102195823 LOC102195823 FUNDC1 FUNDC1 LOC102200032 LOC102200032 map1lc3b map1lc3b atg3 atg3 atg101 atg101 ATG2B ATG2B LOC102208502 LOC102208502 LOC102201703 LOC102201703 ulk2 ulk2 atg4d atg4d
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sqstm1Sequestosome 1. (428 aa)
calcoco2Calcium binding and coiled-coil domain 2. (580 aa)
pdik1lPDLIM1 interacting kinase 1 like; Belongs to the protein kinase superfamily. (341 aa)
LOC102199188Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (494 aa)
becn1Beclin 1, autophagy related. (447 aa)
tp53inp2Uncharacterized protein. (181 aa)
atg12Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (117 aa)
nbr1NBR1 autophagy cargo receptor a. (1070 aa)
ambra1Autophagy/beclin-1 regulator 1b. (1181 aa)
LOC102215228NBR1 autophagy cargo receptor b. (693 aa)
gabarapl2GABA(A) receptor-associated protein like 2. (117 aa)
ENSPNYP00000005296Si:ch1073-143l10.2. (137 aa)
LOC102210230Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (247 aa)
pik3c3Phosphatidylinositol 3-kinase catalytic subunit type 3. (884 aa)
bnip3BCL2 interacting protein 3. (189 aa)
LOC102193458Inflammation and lipid regulator with UBA-like and NBR1-like domains. (280 aa)
LOC102210274Zgc:73226. (183 aa)
atg13Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily. (538 aa)
klhl17Kelch-like family member 17. (597 aa)
gabarapGABA(A) receptor-associated protein b. (122 aa)
LOC102192858Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (408 aa)
STEAP3STEAP3 metalloreductase. (489 aa)
ENSPNYP00000011331GSAP-16 domain-containing protein. (178 aa)
wdr45bWD repeat domain 45B. (344 aa)
atg14Autophagy related 14. (519 aa)
steap2STEAP family member 2, metalloreductase. (487 aa)
ulk3Unc-51 like kinase 3; Belongs to the protein kinase superfamily. (469 aa)
ENSPNYP00000012991ATG16 autophagy related 16-like 2 (S. cerevisiae). (292 aa)
atg10Autophagy_act_C domain-containing protein. (225 aa)
vmp1Vacuole membrane protein 1. (405 aa)
wdr45WD repeat domain 45. (358 aa)
fundc1Uncharacterized protein. (167 aa)
atg5Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
ulk1Unc-51 like autophagy activating kinase 1. (1024 aa)
atg2aAutophagy related 2A. (1973 aa)
pik3r4Phosphoinositide-3-kinase, regulatory subunit 4. (1338 aa)
atg9aAutophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (842 aa)
rb1cc1RB1-inducible coiled-coil 1. (1620 aa)
LOC102192265Microtubule-associated protein 1 light chain 3 gamma. (128 aa)
LOC102204541Microtubule-associated protein 1 light chain 3 gamma, like. (123 aa)
tp53inp1Tumor protein p53 inducible nuclear protein 1. (296 aa)
atg9bAutophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (759 aa)
ENSPNYP00000021288SEFIR domain-containing protein. (112 aa)
LOC102193827BCL2 interacting protein 3 like a. (236 aa)
LOC102213573STEAP family member 4. (448 aa)
steap4STEAP family member 4. (472 aa)
atg4cCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (480 aa)
wipi2WD repeat domain, phosphoinositide interacting 2. (427 aa)
ILRUNInflammation and lipid regulator with UBA-like and NBR1-like domains. (288 aa)
epg5Ectopic P-granules autophagy protein 5 homolog (C. elegans). (2360 aa)
nrbf2Nuclear receptor binding factor 2b. (306 aa)
LOC102205676BCL2 interacting protein 3 like b. (217 aa)
atg7Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 as well as the ATG8 family proteins for their conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Required for autophagic death induced by caspase-8 inhibition. Required for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria [...] (720 aa)
LOC106455903GABA type A receptor associated protein like 2. (121 aa)
WIPI1WD repeat domain, phosphoinositide interacting 1. (443 aa)
map1lc3aMicrotubule-associated protein 1 light chain 3 alpha. (122 aa)
LOC102195676Unc-51 like autophagy activating kinase 1a. (888 aa)
tecpr2Tectonin beta-propeller repeat containing 2. (1365 aa)
LOC102201299Si:ch211-260e23.9. (165 aa)
LOC102192801BCL2 like 13. (554 aa)
atg4bCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (394 aa)
LOC102210867Si:ch211-63o20.7; Belongs to the protein kinase superfamily. (402 aa)
LOC102195823Serine/threonine kinase 35; Belongs to the protein kinase superfamily. (430 aa)
FUNDC1FUN14 domain containing 1. (224 aa)
LOC102200032Vacuole membrane protein 1. (431 aa)
map1lc3bMicrotubule-associated protein 1 light chain 3 beta. (126 aa)
atg3Autophagy-related protein 3. (313 aa)
atg101Autophagy related 101. (218 aa)
ATG2BAutophagy related 2B. (2013 aa)
LOC102208502Zgc:92606. (117 aa)
LOC102201703BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like. (236 aa)
ulk2Unc-51 like autophagy activating kinase 2. (1039 aa)
atg4dCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (500 aa)
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.