5 items (Pundamilia nyererei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	zfand4	Zinc finger, AN1-type domain 4. (733 aa)
	LOC102212050	Ubiquitin-conjugating enzyme E2 variant 1. (151 aa)
	LOC106456278	Ubiquitin-like domain-containing protein. (122 aa)
	rps27a	Ribosomal protein S27a. (188 aa)
	birc6	Baculoviral IAP repeat containing 6. (4874 aa)

Your Current Organism:

Pundamilia nyererei

NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102212050	LOC106456278	ENSPNYP00000017336	ENSPNYP00000023328	Ubiquitin-conjugating enzyme E2 variant 1.	Ubiquitin-like domain-containing protein.	0.999
LOC102212050	birc6	ENSPNYP00000017336	ENSPNYP00000031336	Ubiquitin-conjugating enzyme E2 variant 1.	Baculoviral IAP repeat containing 6.	0.998
LOC102212050	rps27a	ENSPNYP00000017336	ENSPNYP00000026531	Ubiquitin-conjugating enzyme E2 variant 1.	Ribosomal protein S27a.	0.999
LOC102212050	zfand4	ENSPNYP00000017336	ENSPNYP00000010001	Ubiquitin-conjugating enzyme E2 variant 1.	Zinc finger, AN1-type domain 4.	0.960
LOC106456278	LOC102212050	ENSPNYP00000023328	ENSPNYP00000017336	Ubiquitin-like domain-containing protein.	Ubiquitin-conjugating enzyme E2 variant 1.	0.999
LOC106456278	birc6	ENSPNYP00000023328	ENSPNYP00000031336	Ubiquitin-like domain-containing protein.	Baculoviral IAP repeat containing 6.	0.997
LOC106456278	rps27a	ENSPNYP00000023328	ENSPNYP00000026531	Ubiquitin-like domain-containing protein.	Ribosomal protein S27a.	0.996
LOC106456278	zfand4	ENSPNYP00000023328	ENSPNYP00000010001	Ubiquitin-like domain-containing protein.	Zinc finger, AN1-type domain 4.	0.976
birc6	LOC102212050	ENSPNYP00000031336	ENSPNYP00000017336	Baculoviral IAP repeat containing 6.	Ubiquitin-conjugating enzyme E2 variant 1.	0.998
birc6	LOC106456278	ENSPNYP00000031336	ENSPNYP00000023328	Baculoviral IAP repeat containing 6.	Ubiquitin-like domain-containing protein.	0.997
birc6	rps27a	ENSPNYP00000031336	ENSPNYP00000026531	Baculoviral IAP repeat containing 6.	Ribosomal protein S27a.	0.994
birc6	zfand4	ENSPNYP00000031336	ENSPNYP00000010001	Baculoviral IAP repeat containing 6.	Zinc finger, AN1-type domain 4.	0.956
rps27a	LOC102212050	ENSPNYP00000026531	ENSPNYP00000017336	Ribosomal protein S27a.	Ubiquitin-conjugating enzyme E2 variant 1.	0.999
rps27a	LOC106456278	ENSPNYP00000026531	ENSPNYP00000023328	Ribosomal protein S27a.	Ubiquitin-like domain-containing protein.	0.996
rps27a	birc6	ENSPNYP00000026531	ENSPNYP00000031336	Ribosomal protein S27a.	Baculoviral IAP repeat containing 6.	0.994
rps27a	zfand4	ENSPNYP00000026531	ENSPNYP00000010001	Ribosomal protein S27a.	Zinc finger, AN1-type domain 4.	0.999
zfand4	LOC102212050	ENSPNYP00000010001	ENSPNYP00000017336	Zinc finger, AN1-type domain 4.	Ubiquitin-conjugating enzyme E2 variant 1.	0.960
zfand4	LOC106456278	ENSPNYP00000010001	ENSPNYP00000023328	Zinc finger, AN1-type domain 4.	Ubiquitin-like domain-containing protein.	0.976
zfand4	birc6	ENSPNYP00000010001	ENSPNYP00000031336	Zinc finger, AN1-type domain 4.	Baculoviral IAP repeat containing 6.	0.956
zfand4	rps27a	ENSPNYP00000010001	ENSPNYP00000026531	Zinc finger, AN1-type domain 4.	Ribosomal protein S27a.	0.999