STRINGSTRING
cpsf1 cpsf1 sympk sympk WDR33 WDR33 LOC102192255 LOC102192255 cpsf4 cpsf4 cpsf2 cpsf2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cpsf1Cleavage and polyadenylation specific factor 1. (1470 aa)
sympkSymplekin. (1232 aa)
WDR33WD repeat domain 33. (1090 aa)
LOC102192255FIP1 like 1b (S. cerevisiae). (378 aa)
cpsf4Cleavage and polyadenylation specific factor 4. (265 aa)
cpsf2Cleavage and polyadenylation specificity factor subunit 2. (788 aa)
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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