(5 nodes) Heavy metal-associated domain, HMA network (Pundamilia nyererei)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	atp7a	ATPase copper transporting alpha. (1524 aa)
	atox1	Antioxidant 1 copper chaperone. (68 aa)
	cutc	CutC copper transporter homolog (E. coli). (251 aa)
	atp7b	ATPase copper transporting beta. (1294 aa)
	ccs	Copper chaperone for superoxide dismutase. (270 aa)

Your Current Organism:

Pundamilia nyererei

NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
atox1	atp7a	ENSPNYP00000003285	ENSPNYP00000000364	Antioxidant 1 copper chaperone.	ATPase copper transporting alpha.	0.980
atox1	atp7b	ENSPNYP00000003285	ENSPNYP00000016222	Antioxidant 1 copper chaperone.	ATPase copper transporting beta.	0.980
atox1	ccs	ENSPNYP00000003285	ENSPNYP00000031313	Antioxidant 1 copper chaperone.	Copper chaperone for superoxide dismutase.	0.715
atox1	cutc	ENSPNYP00000003285	ENSPNYP00000011839	Antioxidant 1 copper chaperone.	CutC copper transporter homolog (E. coli).	0.587
atp7a	atox1	ENSPNYP00000000364	ENSPNYP00000003285	ATPase copper transporting alpha.	Antioxidant 1 copper chaperone.	0.980
atp7a	ccs	ENSPNYP00000000364	ENSPNYP00000031313	ATPase copper transporting alpha.	Copper chaperone for superoxide dismutase.	0.996
atp7a	cutc	ENSPNYP00000000364	ENSPNYP00000011839	ATPase copper transporting alpha.	CutC copper transporter homolog (E. coli).	0.571
atp7b	atox1	ENSPNYP00000016222	ENSPNYP00000003285	ATPase copper transporting beta.	Antioxidant 1 copper chaperone.	0.980
atp7b	ccs	ENSPNYP00000016222	ENSPNYP00000031313	ATPase copper transporting beta.	Copper chaperone for superoxide dismutase.	0.996
atp7b	cutc	ENSPNYP00000016222	ENSPNYP00000011839	ATPase copper transporting beta.	CutC copper transporter homolog (E. coli).	0.571
ccs	atox1	ENSPNYP00000031313	ENSPNYP00000003285	Copper chaperone for superoxide dismutase.	Antioxidant 1 copper chaperone.	0.715
ccs	atp7a	ENSPNYP00000031313	ENSPNYP00000000364	Copper chaperone for superoxide dismutase.	ATPase copper transporting alpha.	0.996
ccs	atp7b	ENSPNYP00000031313	ENSPNYP00000016222	Copper chaperone for superoxide dismutase.	ATPase copper transporting beta.	0.996
ccs	cutc	ENSPNYP00000031313	ENSPNYP00000011839	Copper chaperone for superoxide dismutase.	CutC copper transporter homolog (E. coli).	0.614
cutc	atox1	ENSPNYP00000011839	ENSPNYP00000003285	CutC copper transporter homolog (E. coli).	Antioxidant 1 copper chaperone.	0.587
cutc	atp7a	ENSPNYP00000011839	ENSPNYP00000000364	CutC copper transporter homolog (E. coli).	ATPase copper transporting alpha.	0.571
cutc	atp7b	ENSPNYP00000011839	ENSPNYP00000016222	CutC copper transporter homolog (E. coli).	ATPase copper transporting beta.	0.571
cutc	ccs	ENSPNYP00000011839	ENSPNYP00000031313	CutC copper transporter homolog (E. coli).	Copper chaperone for superoxide dismutase.	0.614