STRINGSTRING
atg9b atg9b ulk2 ulk2 bcas3 bcas3 ATG2B ATG2B atg16l1 atg16l1 atg101 atg101 ZFYVE1 ZFYVE1 LOC102210867 LOC102210867 snx7 snx7 LOC102195676 LOC102195676 WIPI1 WIPI1 atg7 atg7 ILRUN ILRUN wipi2 wipi2 rb1cc1 rb1cc1 atg9a atg9a atg2a atg2a LOC102203422 LOC102203422 ulk1 ulk1 atg5 atg5 wdr45 wdr45 snx30 snx30 ENSPNYP00000013022 ENSPNYP00000013022 ENSPNYP00000012991 ENSPNYP00000012991 ulk3 ulk3 stbd1 stbd1 atg14 atg14 wdr45b wdr45b atg13 atg13 LOC102193458 LOC102193458 pik3c3 pik3c3 ENSPNYP00000005296 ENSPNYP00000005296 LOC102214936 LOC102214936 LOC102207215 LOC102207215 trappc8 trappc8 LOC102215228 LOC102215228 nbr1 nbr1 atg12 atg12 becn1 becn1 sqstm1 sqstm1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
atg9bAutophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (759 aa)
ulk2Unc-51 like autophagy activating kinase 2. (1039 aa)
bcas3BCAS3 microtubule associated cell migration factor. (932 aa)
ATG2BAutophagy related 2B. (2013 aa)
atg16l1ATG16 autophagy related 16-like 1 (S. cerevisiae). (605 aa)
atg101Autophagy related 101. (218 aa)
ZFYVE1Zinc finger FYVE-type containing 1. (786 aa)
LOC102210867Si:ch211-63o20.7; Belongs to the protein kinase superfamily. (402 aa)
snx7Sorting nexin 7. (418 aa)
LOC102195676Unc-51 like autophagy activating kinase 1a. (888 aa)
WIPI1WD repeat domain, phosphoinositide interacting 1. (443 aa)
atg7Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 as well as the ATG8 family proteins for their conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Required for autophagic death induced by caspase-8 inhibition. Required for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria [...] (720 aa)
ILRUNInflammation and lipid regulator with UBA-like and NBR1-like domains. (288 aa)
wipi2WD repeat domain, phosphoinositide interacting 2. (427 aa)
rb1cc1RB1-inducible coiled-coil 1. (1620 aa)
atg9aAutophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (842 aa)
atg2aAutophagy related 2A. (1973 aa)
LOC102203422Si:dkey-102f14.5. (415 aa)
ulk1Unc-51 like autophagy activating kinase 1. (1024 aa)
atg5Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
wdr45WD repeat domain 45. (358 aa)
snx30Sorting nexin family member 30. (443 aa)
ENSPNYP00000013022ATG16 autophagy related 16-like 2 (S. cerevisiae). (164 aa)
ENSPNYP00000012991ATG16 autophagy related 16-like 2 (S. cerevisiae). (292 aa)
ulk3Unc-51 like kinase 3; Belongs to the protein kinase superfamily. (469 aa)
stbd1CBM20 domain-containing protein. (829 aa)
atg14Autophagy related 14. (519 aa)
wdr45bWD repeat domain 45B. (344 aa)
atg13Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily. (538 aa)
LOC102193458Inflammation and lipid regulator with UBA-like and NBR1-like domains. (280 aa)
pik3c3Phosphatidylinositol 3-kinase catalytic subunit type 3. (884 aa)
ENSPNYP00000005296Si:ch1073-143l10.2. (137 aa)
LOC102214936Zinc finger, FYVE domain containing 1. (776 aa)
LOC102207215Si:ch211-11n16.2. (648 aa)
trappc8Trafficking protein particle complex 8. (1447 aa)
LOC102215228NBR1 autophagy cargo receptor b. (693 aa)
nbr1NBR1 autophagy cargo receptor a. (1070 aa)
atg12Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (117 aa)
becn1Beclin 1, autophagy related. (447 aa)
sqstm1Sequestosome 1. (428 aa)
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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