28 items (Pundamilia nyererei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ercc2	Excision repair cross-complementation group 2. (760 aa)
	dcaf13	Ddb1 and cul4 associated factor 13. (445 aa)
	ENSPNYP00000003560	Uncharacterized protein. (126 aa)
	utp6	UTP6 small subunit processome component. (595 aa)
	kri1	KRI1 homolog. (741 aa)
	abt1	Activator of basal transcription 1. (324 aa)
	tsr2	TSR2 ribosome maturation factor. (219 aa)
	nol10	Nucleolar protein 10. (725 aa)
	nop9	Uncharacterized protein. (613 aa)
	bms1	BMS1 ribosome biogenesis factor. (1208 aa)
	utp3	UTP3 small subunit processome component. (432 aa)
	utp23	UTP23 small subunit processome component. (254 aa)
	tbl3	Transducin (beta)-like 3. (750 aa)
	utp4	UTP4 small subunit processome component. (684 aa)
	fam207a	Family with sequence similarity 207 member A. (253 aa)
	tsr1	TSR1 ribosome maturation factor. (828 aa)
	ngdn	Neuroguidin, EIF4E binding protein. (325 aa)
	ENSPNYP00000014665	BP28CT domain-containing protein. (333 aa)
	ENSPNYP00000014631	U3snoRNP10 domain-containing protein. (326 aa)
	wdr46	WD repeat domain 46. (597 aa)
	mrps11	Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family. (196 aa)
	LOC102195041	PWP2 small subunit processome component. (723 aa)
	dhx37	DEAH (Asp-Glu-Ala-His) box polypeptide 37. (1098 aa)
	bysl	Bystin-like. (435 aa)
	rpp40	Ribonuclease P/MRP 40 subunit. (280 aa)
	wdr43	WD repeat domain 43. (650 aa)
	UTP25	UTP25 small subunit processor component. (592 aa)
	LOC102207990	UTP25 small subunit processor component. (670 aa)

Your Current Organism:

Pundamilia nyererei

NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPNYP00000003560	ENSPNYP00000014631	ENSPNYP00000003560	ENSPNYP00000014631	Uncharacterized protein.	U3snoRNP10 domain-containing protein.	0.511
ENSPNYP00000003560	ENSPNYP00000014665	ENSPNYP00000003560	ENSPNYP00000014665	Uncharacterized protein.	BP28CT domain-containing protein.	0.511
ENSPNYP00000003560	LOC102195041	ENSPNYP00000003560	ENSPNYP00000011032	Uncharacterized protein.	PWP2 small subunit processome component.	0.862
ENSPNYP00000003560	LOC102207990	ENSPNYP00000003560	ENSPNYP00000030416	Uncharacterized protein.	UTP25 small subunit processor component.	0.420
ENSPNYP00000003560	UTP25	ENSPNYP00000003560	ENSPNYP00000031372	Uncharacterized protein.	UTP25 small subunit processor component.	0.420
ENSPNYP00000003560	abt1	ENSPNYP00000003560	ENSPNYP00000026421	Uncharacterized protein.	Activator of basal transcription 1.	0.770
ENSPNYP00000003560	bms1	ENSPNYP00000003560	ENSPNYP00000025064	Uncharacterized protein.	BMS1 ribosome biogenesis factor.	0.919
ENSPNYP00000003560	bysl	ENSPNYP00000003560	ENSPNYP00000010314	Uncharacterized protein.	Bystin-like.	0.940
ENSPNYP00000003560	dcaf13	ENSPNYP00000003560	ENSPNYP00000004973	Uncharacterized protein.	Ddb1 and cul4 associated factor 13.	0.865
ENSPNYP00000003560	dhx37	ENSPNYP00000003560	ENSPNYP00000010985	Uncharacterized protein.	DEAH (Asp-Glu-Ala-His) box polypeptide 37.	0.438
ENSPNYP00000003560	kri1	ENSPNYP00000003560	ENSPNYP00000000822	Uncharacterized protein.	KRI1 homolog.	0.768
ENSPNYP00000003560	ngdn	ENSPNYP00000003560	ENSPNYP00000017423	Uncharacterized protein.	Neuroguidin, EIF4E binding protein.	0.893
ENSPNYP00000003560	nol10	ENSPNYP00000003560	ENSPNYP00000027301	Uncharacterized protein.	Nucleolar protein 10.	0.849
ENSPNYP00000003560	nop9	ENSPNYP00000003560	ENSPNYP00000026080	Uncharacterized protein.	Uncharacterized protein.	0.847
ENSPNYP00000003560	tbl3	ENSPNYP00000003560	ENSPNYP00000022759	Uncharacterized protein.	Transducin (beta)-like 3.	0.865
ENSPNYP00000003560	tsr1	ENSPNYP00000003560	ENSPNYP00000021435	Uncharacterized protein.	TSR1 ribosome maturation factor.	0.946
ENSPNYP00000003560	tsr2	ENSPNYP00000003560	ENSPNYP00000026511	Uncharacterized protein.	TSR2 ribosome maturation factor.	0.861
ENSPNYP00000003560	utp23	ENSPNYP00000003560	ENSPNYP00000023348	Uncharacterized protein.	UTP23 small subunit processome component.	0.888
ENSPNYP00000003560	utp3	ENSPNYP00000003560	ENSPNYP00000023568	Uncharacterized protein.	UTP3 small subunit processome component.	0.932
ENSPNYP00000003560	utp4	ENSPNYP00000003560	ENSPNYP00000022679	Uncharacterized protein.	UTP4 small subunit processome component.	0.850