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mfap1 mfap1 smndc1 smndc1 ENSPNYP00000031925 ENSPNYP00000031925 LOC102202464 LOC102202464 ENSPNYP00000031633 ENSPNYP00000031633 sf3b2 sf3b2 LOC102192455 LOC102192455 gemin2 gemin2 pnn pnn zmat2 zmat2 lsm5 lsm5 snw1 snw1 prkrip1 prkrip1 sf3b6 sf3b6 ENSPNYP00000028858 ENSPNYP00000028858 LOC102214456 LOC102214456 ddx23 ddx23 wbp11 wbp11 rnpc3 rnpc3 syncrip syncrip ENSPNYP00000026924 ENSPNYP00000026924 tra2a tra2a ppil1 ppil1 snu13 snu13 cwc15 cwc15 lsm2 lsm2 LOC102192541 LOC102192541 WDR25 WDR25 dhx16 dhx16 sf3a1 sf3a1 ncmap ncmap bud31 bud31 zrsr2 zrsr2 gpatch1 gpatch1 tfip11 tfip11 ENSPNYP00000023738 ENSPNYP00000023738 snrnp200 snrnp200 eif4a3 eif4a3 lsm4 lsm4 htatsf1 htatsf1 ENSPNYP00000022113 ENSPNYP00000022113 aqr aqr prpf8 prpf8 ccdc12 ccdc12 ccdc130 ccdc130 LOC102205599 LOC102205599 snrpb2 snrpb2 snrnp48 snrnp48 wdr83 wdr83 LOC102213887 LOC102213887 rbm17 rbm17 ENSPNYP00000019900 ENSPNYP00000019900 sf3b1 sf3b1 ctnnbl1 ctnnbl1 LOC102201286 LOC102201286 snrpb snrpb usp39 usp39 SART1 SART1 bcas2 bcas2 ZNF830 ZNF830 xab2 xab2 gpkow gpkow ppp1r8 ppp1r8 LOC102192481 LOC102192481 ENSPNYP00000018652 ENSPNYP00000018652 rnf113a rnf113a plrg1 plrg1 rbm8a rbm8a dhx38 dhx38 shd shd yju2 yju2 snrpd3 snrpd3 luc7l3 luc7l3 SNIP1 SNIP1 rbm41 rbm41 sf3b4 sf3b4 lsm6 lsm6 rbmx rbmx eftud2 eftud2 hnrnpr hnrnpr casc3 casc3 snrpd2 snrpd2 LOC102199287 LOC102199287 lsm8 lsm8 snrpd1 snrpd1 myef2 myef2 hnrnpk hnrnpk cdc40 cdc40 cwc22 cwc22 cwf19l1 cwf19l1 ppih ppih snrnp40 snrnp40 lsm3 lsm3 ess2 ess2 snrpg snrpg ENSPNYP00000011626 ENSPNYP00000011626 zmat5 zmat5 zcrb1 zcrb1 DHX15 DHX15 prpf4 prpf4 dhx34 dhx34 LOC102195941 LOC102195941 snrnp25 snrnp25 ENSPNYP00000010244 ENSPNYP00000010244 smu1 smu1 prpf38b prpf38b cirbp cirbp ENSPNYP00000009293 ENSPNYP00000009293 lsm7 lsm7 sf3a2 sf3a2 LOC102212555 LOC102212555 ppie ppie hnrnpm hnrnpm cactin cactin mtrex mtrex snrpa snrpa LOC102205645 LOC102205645 ENSPNYP00000008031 ENSPNYP00000008031 LOC102211427 LOC102211427 snrpe snrpe prpf38a prpf38a ppwd1 ppwd1 ppil2 ppil2 cwc27 cwc27 ENSPNYP00000006596 ENSPNYP00000006596 syf2 syf2 SNRPC SNRPC adar adar ENSPNYP00000006193 ENSPNYP00000006193 sf1 sf1 wbp4 wbp4 phf5a phf5a prpf3 prpf3 LOC102202651 LOC102202651 ENSPNYP00000005329 ENSPNYP00000005329 hnrnpc hnrnpc txnl4b txnl4b sf3b3 sf3b3 prpf18 prpf18 prpf4b prpf4b snrpa1 snrpa1 snrnp70 snrnp70 LOC102198430 LOC102198430 dqx1 dqx1 SMU1 SMU1 prpf31 prpf31 sf3b5 sf3b5 prpf39 prpf39 crnkl1 crnkl1 prpf6 prpf6 aar2 aar2 prpf40a prpf40a dhx32 dhx32 dhx35 dhx35 u2af2 u2af2 dhx8 dhx8 ENSPNYP00000001645 ENSPNYP00000001645 tra2b tra2b txnl4a txnl4a LOC102193560 LOC102193560 prpf19 prpf19 sf3a3 sf3a3 dnajc17 dnajc17 rbm22 rbm22 slu7 slu7 DDX41 DDX41
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mfap1Microfibril associated protein 1. (441 aa)
smndc1Survival motor neuron domain containing 1. (229 aa)
ENSPNYP00000031925Slu7 domain-containing protein. (505 aa)
LOC102202464Zgc:158803. (433 aa)
ENSPNYP00000031633Cir_N domain-containing protein. (125 aa)
sf3b2Splicing factor 3b, subunit 2. (740 aa)
LOC102192455Uncharacterized protein. (227 aa)
gemin2Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. (266 aa)
pnnPinin, desmosome associated protein. (654 aa)
zmat2Zinc finger, matrin-type 2. (201 aa)
lsm5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (88 aa)
snw1SNW domain containing 1. (536 aa)
prkrip1PRKR interacting protein 1. (193 aa)
sf3b6Splicing factor 3b, subunit 6. (125 aa)
ENSPNYP00000028858Small nuclear ribonucleoprotein polypeptide F. (85 aa)
LOC102214456Galectin. (376 aa)
ddx23DEAD (Asp-Glu-Ala-Asp) box polypeptide 23. (832 aa)
wbp11Uncharacterized protein. (737 aa)
rnpc3RNA-binding region (RNP1, RRM) containing 3. (498 aa)
syncripSynaptotagmin binding, cytoplasmic RNA interacting protein, like. (542 aa)
ENSPNYP00000026924Uncharacterized protein. (370 aa)
tra2aTransformer 2 alpha homolog. (279 aa)
ppil1Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (166 aa)
snu13Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
cwc15CWC15 spliceosome associated protein homolog. (237 aa)
lsm2Smx5. (140 aa)
LOC102192541U2 small nuclear RNA auxiliary factor 1. (238 aa)
WDR25WD repeat domain 25. (503 aa)
dhx16DEAH (Asp-Glu-Ala-His) box polypeptide 16. (970 aa)
sf3a1Splicing factor 3a, subunit 1. (784 aa)
ncmapUncharacterized protein. (117 aa)
bud31BUD31 homolog. (134 aa)
zrsr2Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2. (524 aa)
gpatch1G patch domain containing 1. (889 aa)
tfip11Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Belongs to the TFP11/STIP family. (830 aa)
ENSPNYP00000023738LUC7-like (S. cerevisiae). (260 aa)
snrnp200Small nuclear ribonucleoprotein 200 (U5). (2063 aa)
eif4a3Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. (406 aa)
lsm4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (146 aa)
htatsf1HIV-1 Tat specific factor 1. (452 aa)
ENSPNYP00000022113Si:zfos-375h5.1. (200 aa)
aqrAquarius intron-binding spliceosomal factor. (1472 aa)
prpf8Pre-mRNA processing factor 8. (2333 aa)
ccdc12Coiled-coil domain containing 12. (163 aa)
ccdc130Coiled-coil domain containing 130. (401 aa)
LOC102205599Zgc:103692. (291 aa)
snrpb2Small nuclear ribonucleoprotein polypeptide B2. (247 aa)
snrnp48Small nuclear ribonucleoprotein 48 (U11/U12). (311 aa)
wdr83WD repeat domain containing 83. (317 aa)
LOC102213887Si:ch211-114c17.1. (646 aa)
rbm17RNA binding motif protein 17. (362 aa)
ENSPNYP00000019900Uncharacterized protein. (164 aa)
sf3b1Splicing factor 3b, subunit 1. (1311 aa)
ctnnbl1Catenin, beta like 1. (577 aa)
LOC102201286RRM domain-containing protein. (257 aa)
snrpbSmall nuclear ribonucleoprotein-associated protein. (240 aa)
usp39Ubiquitin specific peptidase 39. (500 aa)
SART1Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. (769 aa)
bcas2BCAS2 pre-mRNA processing factor. (225 aa)
ZNF830Zinc finger protein 830. (345 aa)
xab2XPA binding protein 2. (849 aa)
gpkowG patch domain and KOW motifs. (518 aa)
ppp1r8Protein phosphatase 1, regulatory subunit 8b. (349 aa)
LOC102192481Survival of motor neuron 1, telomeric. (282 aa)
ENSPNYP00000018652Zinc finger, CCHC domain containing 8. (636 aa)
rnf113aRing finger protein 113A. (322 aa)
plrg1Pleiotropic regulator 1. (551 aa)
rbm8aRNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (175 aa)
dhx38DEAH (Asp-Glu-Ala-His) box polypeptide 38. (1242 aa)
shdSrc homology 2 domain containing transforming protein D, a. (406 aa)
yju2YJU2 splicing factor homolog. (340 aa)
snrpd3Small nuclear ribonucleoprotein Sm D3. (127 aa)
luc7l3LUC7-like 3 pre-mRNA splicing factor. (487 aa)
SNIP1Smad nuclear interacting protein 1. (376 aa)
rbm41RNA binding motif protein 41. (444 aa)
sf3b4Splicing factor 3b, subunit 4. (401 aa)
lsm6LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated. (81 aa)
rbmxRNA binding motif protein X-linked. (391 aa)
eftud2Elongation factor Tu GTP binding domain containing 2. (971 aa)
hnrnprHeterogeneous nuclear ribonucleoprotein R. (631 aa)
casc3Casc3 exon junction complex subunit. (762 aa)
snrpd2Small nuclear ribonucleoprotein Sm D2. (118 aa)
LOC102199287U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (466 aa)
lsm8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
snrpd1Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (202 aa)
myef2Myelin expression factor 2. (527 aa)
hnrnpkHeterogeneous nuclear ribonucleoprotein K. (435 aa)
cdc40Cell division cycle 40 homolog (S. cerevisiae). (581 aa)
cwc22CWC22 spliceosome associated protein homolog. (687 aa)
cwf19l1CWF19 like cell cycle control factor 1. (553 aa)
ppihPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (177 aa)
snrnp40Small nuclear ribonucleoprotein 40 (U5). (347 aa)
lsm3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (139 aa)
ess2Ess-2 splicing factor homolog. (476 aa)
snrpgSmall nuclear ribonucleoprotein G. (76 aa)
ENSPNYP00000011626Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (162 aa)
zmat5Zinc finger, matrin-type 5. (175 aa)
zcrb1Zinc finger CCHC-type and RNA binding motif 1. (219 aa)
DHX15DEAH-box helicase 15. (762 aa)
prpf4PRP4 pre-mRNA processing factor 4 homolog (yeast). (510 aa)
dhx34DEAH (Asp-Glu-Ala-His) box polypeptide 34. (1135 aa)
LOC102195941Galectin. (242 aa)
snrnp25Small nuclear ribonucleoprotein 25. (185 aa)
ENSPNYP00000010244Serine/arginine repetitive matrix 4. (444 aa)
smu1SMU1 DNA replication regulator and spliceosomal factor b. (507 aa)
prpf38bPre-mRNA processing factor 38B. (461 aa)
cirbpCold inducible RNA binding protein b. (183 aa)
ENSPNYP00000009293SURP motif domain-containing protein. (312 aa)
lsm7LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated. (103 aa)
sf3a2Splicing factor 3a, subunit 2. (294 aa)
LOC102212555DEAH (Asp-Glu-Ala-His) box helicase 15. (751 aa)
ppiePeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (299 aa)
hnrnpmHeterogeneous nuclear ribonucleoprotein M. (665 aa)
cactinCactin. (731 aa)
mtrexMtr4 exosome RNA helicase. (1037 aa)
snrpaSmall nuclear ribonucleoprotein polypeptide A. (280 aa)
LOC102205645Zgc:153119. (328 aa)
ENSPNYP00000008031Cir_N domain-containing protein. (67 aa)
LOC102211427Heterogeneous nuclear ribonucleoprotein K, like. (429 aa)
snrpeSmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
prpf38aPre-mRNA processing factor 38A. (309 aa)
ppwd1Peptidylprolyl isomerase domain and WD repeat containing 1. (626 aa)
ppil2Peptidylprolyl isomerase (cyclophilin)-like 2. (525 aa)
cwc27CWC27 spliceosome associated cyclophilin. (450 aa)
ENSPNYP00000006596PWI domain-containing protein. (238 aa)
syf2SYF2 pre-mRNA-splicing factor. (238 aa)
SNRPCU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (134 aa)
adarAdenosine deaminase RNA specific. (1359 aa)
ENSPNYP00000006193Uncharacterized protein. (73 aa)
sf1Splicing factor 1. (680 aa)
wbp4Uncharacterized protein. (416 aa)
phf5aPHD finger protein 5A. (110 aa)
prpf3PRP3 pre-mRNA processing factor 3 homolog (yeast). (723 aa)
LOC102202651DEAH (Asp-Glu-Ala-His) box polypeptide 32b. (740 aa)
ENSPNYP00000005329Slu7 domain-containing protein. (228 aa)
hnrnpcRRM domain-containing protein. (298 aa)
txnl4bThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (149 aa)
sf3b3Splicing factor 3b, subunit 3. (1217 aa)
prpf18PRP18 pre-mRNA processing factor 18 homolog (yeast). (350 aa)
prpf4bPre-mRNA processing factor 4Bb. (1014 aa)
snrpa1Small nuclear ribonucleoprotein polypeptide A. (243 aa)
snrnp70Small nuclear ribonucleoprotein 70 (U1). (475 aa)
LOC102198430Synaptotagmin binding, cytoplasmic RNA interacting protein. (634 aa)
dqx1DEAQ box RNA-dependent ATPase 1. (817 aa)
SMU1SMU1 DNA replication regulator and spliceosomal factor. (513 aa)
prpf31PRP31 pre-mRNA processing factor 31 homolog (yeast). (507 aa)
sf3b5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
prpf39PRP39 pre-mRNA processing factor 39 homolog (yeast). (778 aa)
crnkl1Crooked neck pre-mRNA splicing factor 1. (755 aa)
prpf6PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae). (892 aa)
aar2AAR2 splicing factor. (386 aa)
prpf40aPRP40 pre-mRNA processing factor 40 homolog A. (817 aa)
dhx32DEAH (Asp-Glu-Ala-His) box polypeptide 32a. (726 aa)
dhx35DEAH-box helicase 35. (699 aa)
u2af2U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (470 aa)
dhx8DEAH (Asp-Glu-Ala-His) box polypeptide 8. (1213 aa)
ENSPNYP00000001645Galectin. (94 aa)
tra2bTransformer 2 beta homolog. (283 aa)
txnl4aThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
LOC102193560CCHC-type domain-containing protein. (451 aa)
prpf19Pre-mRNA processing factor 19. (505 aa)
sf3a3Splicing factor 3a, subunit 3. (501 aa)
dnajc17DnaJ (Hsp40) homolog, subfamily C, member 17. (310 aa)
rbm22RNA binding motif protein 22. (363 aa)
slu7SLU7 homolog, splicing factor. (566 aa)
DDX41DEAD-box helicase 41. (614 aa)
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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