8 items (Pundamilia nyererei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	snrpg	Small nuclear ribonucleoprotein G. (76 aa)
	prpf31	PRP31 pre-mRNA processing factor 31 homolog (yeast). (507 aa)
	snrpe	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
	snrpd1	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (202 aa)
	snrpd2	Small nuclear ribonucleoprotein Sm D2. (118 aa)
	snrpd3	Small nuclear ribonucleoprotein Sm D3. (127 aa)
	snrpb	Small nuclear ribonucleoprotein-associated protein. (240 aa)
	ENSPNYP00000028858	Small nuclear ribonucleoprotein polypeptide F. (85 aa)

Your Current Organism:

Pundamilia nyererei

NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPNYP00000028858	prpf31	ENSPNYP00000028858	ENSPNYP00000002881	Small nuclear ribonucleoprotein polypeptide F.	PRP31 pre-mRNA processing factor 31 homolog (yeast).	0.985
ENSPNYP00000028858	snrpb	ENSPNYP00000028858	ENSPNYP00000019566	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein-associated protein.	0.995
ENSPNYP00000028858	snrpd1	ENSPNYP00000028858	ENSPNYP00000014413	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.999
ENSPNYP00000028858	snrpd2	ENSPNYP00000028858	ENSPNYP00000015609	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein Sm D2.	0.999
ENSPNYP00000028858	snrpd3	ENSPNYP00000028858	ENSPNYP00000017633	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein Sm D3.	0.999
ENSPNYP00000028858	snrpe	ENSPNYP00000028858	ENSPNYP00000007302	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
ENSPNYP00000028858	snrpg	ENSPNYP00000028858	ENSPNYP00000011810	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein G.	0.999
prpf31	ENSPNYP00000028858	ENSPNYP00000002881	ENSPNYP00000028858	PRP31 pre-mRNA processing factor 31 homolog (yeast).	Small nuclear ribonucleoprotein polypeptide F.	0.985
prpf31	snrpb	ENSPNYP00000002881	ENSPNYP00000019566	PRP31 pre-mRNA processing factor 31 homolog (yeast).	Small nuclear ribonucleoprotein-associated protein.	0.927
prpf31	snrpd1	ENSPNYP00000002881	ENSPNYP00000014413	PRP31 pre-mRNA processing factor 31 homolog (yeast).	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.979
prpf31	snrpd2	ENSPNYP00000002881	ENSPNYP00000015609	PRP31 pre-mRNA processing factor 31 homolog (yeast).	Small nuclear ribonucleoprotein Sm D2.	0.975
prpf31	snrpd3	ENSPNYP00000002881	ENSPNYP00000017633	PRP31 pre-mRNA processing factor 31 homolog (yeast).	Small nuclear ribonucleoprotein Sm D3.	0.980
prpf31	snrpe	ENSPNYP00000002881	ENSPNYP00000007302	PRP31 pre-mRNA processing factor 31 homolog (yeast).	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.990
prpf31	snrpg	ENSPNYP00000002881	ENSPNYP00000011810	PRP31 pre-mRNA processing factor 31 homolog (yeast).	Small nuclear ribonucleoprotein G.	0.974
snrpb	ENSPNYP00000028858	ENSPNYP00000019566	ENSPNYP00000028858	Small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein polypeptide F.	0.995
snrpb	prpf31	ENSPNYP00000019566	ENSPNYP00000002881	Small nuclear ribonucleoprotein-associated protein.	PRP31 pre-mRNA processing factor 31 homolog (yeast).	0.927
snrpb	snrpd1	ENSPNYP00000019566	ENSPNYP00000014413	Small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.995
snrpb	snrpd2	ENSPNYP00000019566	ENSPNYP00000015609	Small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein Sm D2.	0.996
snrpb	snrpd3	ENSPNYP00000019566	ENSPNYP00000017633	Small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein Sm D3.	0.996
snrpb	snrpe	ENSPNYP00000019566	ENSPNYP00000007302	Small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.996