21 items (Pundamilia nyererei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rpsa	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (370 aa)
	rps26	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (135 aa)
	fau	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
	rps9	Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (194 aa)
	ENSPNYP00000003474	Uncharacterized protein. (80 aa)
	rps28	Ribosomal protein S28. (69 aa)
	rps2	Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (279 aa)
	eif2d	Eukaryotic translation initiation factor 2D. (542 aa)
	LOC102195390	40S ribosomal protein S27. (84 aa)
	dhx29	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. (1321 aa)
	rps6	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (251 aa)
	mrps11	Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family. (196 aa)
	LOC102214064	40S ribosomal protein S27. (84 aa)
	rps27l	40S ribosomal protein S27. (90 aa)
	rps23	Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
	rps3a	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (266 aa)
	rps5	Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (203 aa)
	ENSPNYP00000022109	Uncharacterized protein. (106 aa)
	LOC102200763	40S ribosomal protein S27. (84 aa)
	eif2a	Eukaryotic translation initiation factor 2A; Functions in the early steps of protein synthesis of a small number of specific mRNAs. Acts by directing the binding of methionyl- tRNAi to 40S ribosomal subunits. In contrast to the eIF-2 complex, it binds methionyl-tRNAi to 40S subunits in a codon-dependent manner, whereas the eIF-2 complex binds methionyl-tRNAi to 40S subunits in a GTP-dependent manner. (580 aa)
	rps21	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (83 aa)

Your Current Organism:

Pundamilia nyererei

NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPNYP00000003474	ENSPNYP00000022109	ENSPNYP00000003474	ENSPNYP00000022109	Uncharacterized protein.	Uncharacterized protein.	0.997
ENSPNYP00000003474	LOC102195390	ENSPNYP00000003474	ENSPNYP00000006131	Uncharacterized protein.	40S ribosomal protein S27.	0.994
ENSPNYP00000003474	LOC102200763	ENSPNYP00000003474	ENSPNYP00000029050	Uncharacterized protein.	40S ribosomal protein S27.	0.994
ENSPNYP00000003474	LOC102214064	ENSPNYP00000003474	ENSPNYP00000014890	Uncharacterized protein.	40S ribosomal protein S27.	0.994
ENSPNYP00000003474	eif2d	ENSPNYP00000003474	ENSPNYP00000005807	Uncharacterized protein.	Eukaryotic translation initiation factor 2D.	0.735
ENSPNYP00000003474	fau	ENSPNYP00000003474	ENSPNYP00000002628	Uncharacterized protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
ENSPNYP00000003474	mrps11	ENSPNYP00000003474	ENSPNYP00000011095	Uncharacterized protein.	Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.	0.983
ENSPNYP00000003474	rps2	ENSPNYP00000003474	ENSPNYP00000005304	Uncharacterized protein.	Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	0.999
ENSPNYP00000003474	rps21	ENSPNYP00000003474	ENSPNYP00000031672	Uncharacterized protein.	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.	0.999
ENSPNYP00000003474	rps23	ENSPNYP00000003474	ENSPNYP00000017433	Uncharacterized protein.	Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.	0.999
ENSPNYP00000003474	rps26	ENSPNYP00000003474	ENSPNYP00000002279	Uncharacterized protein.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.999
ENSPNYP00000003474	rps27l	ENSPNYP00000003474	ENSPNYP00000016355	Uncharacterized protein.	40S ribosomal protein S27.	0.994
ENSPNYP00000003474	rps28	ENSPNYP00000003474	ENSPNYP00000004074	Uncharacterized protein.	Ribosomal protein S28.	0.999
ENSPNYP00000003474	rps3a	ENSPNYP00000003474	ENSPNYP00000018092	Uncharacterized protein.	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	0.997
ENSPNYP00000003474	rps5	ENSPNYP00000003474	ENSPNYP00000021430	Uncharacterized protein.	Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.	0.999
ENSPNYP00000003474	rps6	ENSPNYP00000003474	ENSPNYP00000010248	Uncharacterized protein.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.999
ENSPNYP00000003474	rps9	ENSPNYP00000003474	ENSPNYP00000002680	Uncharacterized protein.	Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.	0.999
ENSPNYP00000003474	rpsa	ENSPNYP00000003474	ENSPNYP00000001643	Uncharacterized protein.	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family.	0.999
ENSPNYP00000022109	ENSPNYP00000003474	ENSPNYP00000022109	ENSPNYP00000003474	Uncharacterized protein.	Uncharacterized protein.	0.997
ENSPNYP00000022109	LOC102195390	ENSPNYP00000022109	ENSPNYP00000006131	Uncharacterized protein.	40S ribosomal protein S27.	0.987