STRINGSTRING
noc2l noc2l wdr3 wdr3 mak16 mak16 mphosph10 mphosph10 ftsj3 ftsj3 ENSPNYP00000014665 ENSPNYP00000014665 utp20 utp20 wdr36 wdr36 utp11 utp11 ngdn ngdn noc4l noc4l fbl fbl LOC102214041 LOC102214041 LOC102207990 LOC102207990 hunk hunk emg1 emg1 ltv1 ltv1 UTP25 UTP25 rrp9 rrp9 znf622 znf622 prkdc prkdc EIF6 EIF6 imp4 imp4 nop9 nop9 rrp7a rrp7a nol10 nol10 krr1 krr1 nol6 nol6 ENSPNYP00000029539 ENSPNYP00000029539 ENSPNYP00000029912 ENSPNYP00000029912 UTP14C UTP14C tsr1 tsr1 fam207a fam207a ebna1bp2 ebna1bp2 pes1 pes1 utp4 utp4 rpf1 rpf1 tbl3 tbl3 ENSPNYP00000023311 ENSPNYP00000023311 utp23 utp23 utp3 utp3 mrto4 mrto4 riok2 riok2 bms1 bms1 wdr12 wdr12 nop58 nop58 riok1 riok1 pdcd11 pdcd11 dcaf13 dcaf13 nop56 nop56 LOC102195041 LOC102195041 wdr74 wdr74 rrp15 rrp15 srfbp1 srfbp1 wdr46 wdr46 bop1 bop1 ENSPNYP00000014631 ENSPNYP00000014631 riok3 riok3 rsl1d1 rsl1d1 ENSPNYP00000003560 ENSPNYP00000003560 utp6 utp6 xrcc5 xrcc5 nsa2 nsa2 kri1 kri1 LOC102213344 LOC102213344 imp3 imp3 nop14 nop14 bysl bysl
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
noc2lNOC2-like nucleolar associated transcriptional repressor. (749 aa)
wdr3WD repeat domain 3. (911 aa)
mak16Protein MAK16 homolog; Belongs to the MAK16 family. (275 aa)
mphosph10U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family. (679 aa)
ftsj3pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (734 aa)
ENSPNYP00000014665BP28CT domain-containing protein. (333 aa)
utp20UTP20 small subunit processome component. (2794 aa)
wdr36WD repeat domain 36. (889 aa)
utp11U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (254 aa)
ngdnNeuroguidin, EIF4E binding protein. (325 aa)
noc4lNucleolar complex associated 4 homolog. (530 aa)
fblFibrillarin. (315 aa)
LOC102214041Uncharacterized protein. (106 aa)
LOC102207990UTP25 small subunit processor component. (670 aa)
hunkHormonally up-regulated Neu-associated kinase. (602 aa)
emg1EMG1 N1-specific pseudouridine methyltransferase. (237 aa)
ltv1LTV1 ribosome biogenesis factor. (467 aa)
UTP25UTP25 small subunit processor component. (592 aa)
rrp9Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein. (482 aa)
znf622Zinc finger protein 622. (474 aa)
prkdcProtein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family. (3978 aa)
EIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (222 aa)
imp4IMP U3 small nucleolar ribonucleoprotein 4. (291 aa)
nop9Uncharacterized protein. (613 aa)
rrp7aRibosomal RNA processing 7 homolog A. (282 aa)
nol10Nucleolar protein 10. (725 aa)
krr1KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (386 aa)
nol6Nucleolar protein 6. (1138 aa)
ENSPNYP00000029539Uncharacterized protein. (247 aa)
ENSPNYP00000029912Si:ch211-197l9.5. (273 aa)
UTP14CUTP14C small subunit processome component. (775 aa)
tsr1TSR1 ribosome maturation factor. (828 aa)
fam207aFamily with sequence similarity 207 member A. (253 aa)
ebna1bp2EBNA1 binding protein 2. (314 aa)
pes1Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (563 aa)
utp4UTP4 small subunit processome component. (684 aa)
rpf1Ribosome production factor 1 homolog. (349 aa)
tbl3Transducin (beta)-like 3. (750 aa)
ENSPNYP00000023311UTP18 small subunit processome component. (101 aa)
utp23UTP23 small subunit processome component. (254 aa)
utp3UTP3 small subunit processome component. (432 aa)
mrto4Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (239 aa)
riok2RIO kinase 2 (yeast). (525 aa)
bms1BMS1 ribosome biogenesis factor. (1208 aa)
wdr12Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (421 aa)
nop58NOP58 ribonucleoprotein homolog (yeast). (536 aa)
riok1RIO kinase 1 (yeast). (313 aa)
pdcd11Programmed cell death 11. (1805 aa)
dcaf13Ddb1 and cul4 associated factor 13. (445 aa)
nop56NOP56 ribonucleoprotein homolog. (572 aa)
LOC102195041PWP2 small subunit processome component. (723 aa)
wdr74WD repeat domain 74. (375 aa)
rrp15Ribosomal RNA processing 15 homolog. (241 aa)
srfbp1BUD22 domain-containing protein. (536 aa)
wdr46WD repeat domain 46. (597 aa)
bop1Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (679 aa)
ENSPNYP00000014631U3snoRNP10 domain-containing protein. (326 aa)
riok3Serine/threonine-protein kinase RIO3; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (508 aa)
rsl1d1Ribosomal L1 domain containing 1. (364 aa)
ENSPNYP00000003560Uncharacterized protein. (126 aa)
utp6UTP6 small subunit processome component. (595 aa)
xrcc5X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. (723 aa)
nsa2NSA2 ribosome biogenesis homolog (S. cerevisiae). (260 aa)
kri1KRI1 homolog. (741 aa)
LOC102213344Uncharacterized protein. (680 aa)
imp3IMP U3 small nucleolar ribonucleoprotein 3. (183 aa)
nop14NOP14 nucleolar protein homolog (yeast). (862 aa)
byslBystin-like. (435 aa)
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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