8 items (Pundamilia nyererei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ttc8	Tetratricopeptide repeat domain 8. (475 aa)
	bbs9	Bardet-Biedl syndrome 9. (765 aa)
	bbs4	Bardet-Biedl syndrome 4. (503 aa)
	bbs5	Bardet-Biedl syndrome 5 protein homolog; Required for ciliogenesis; Belongs to the BBS5 family. (321 aa)
	bbs7	Bardet-Biedl syndrome 7. (704 aa)
	ENSPNYP00000002581	BBSome interacting protein 1. (64 aa)
	bbs2	Bardet-Biedl syndrome 2 protein homolog. (689 aa)
	bbs1	Bardet-Biedl syndrome 1. (583 aa)

Your Current Organism:

Pundamilia nyererei

NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPNYP00000002581	bbs1	ENSPNYP00000002581	ENSPNYP00000023117	BBSome interacting protein 1.	Bardet-Biedl syndrome 1.	0.947
ENSPNYP00000002581	bbs2	ENSPNYP00000002581	ENSPNYP00000016924	BBSome interacting protein 1.	Bardet-Biedl syndrome 2 protein homolog.	0.885
ENSPNYP00000002581	bbs4	ENSPNYP00000002581	ENSPNYP00000014588	BBSome interacting protein 1.	Bardet-Biedl syndrome 4.	0.911
ENSPNYP00000002581	bbs5	ENSPNYP00000002581	ENSPNYP00000007944	BBSome interacting protein 1.	Bardet-Biedl syndrome 5 protein homolog; Required for ciliogenesis; Belongs to the BBS5 family.	0.757
ENSPNYP00000002581	bbs7	ENSPNYP00000002581	ENSPNYP00000001387	BBSome interacting protein 1.	Bardet-Biedl syndrome 7.	0.924
ENSPNYP00000002581	bbs9	ENSPNYP00000002581	ENSPNYP00000015911	BBSome interacting protein 1.	Bardet-Biedl syndrome 9.	0.923
ENSPNYP00000002581	ttc8	ENSPNYP00000002581	ENSPNYP00000030791	BBSome interacting protein 1.	Tetratricopeptide repeat domain 8.	0.926
bbs1	ENSPNYP00000002581	ENSPNYP00000023117	ENSPNYP00000002581	Bardet-Biedl syndrome 1.	BBSome interacting protein 1.	0.947
bbs1	bbs2	ENSPNYP00000023117	ENSPNYP00000016924	Bardet-Biedl syndrome 1.	Bardet-Biedl syndrome 2 protein homolog.	0.997
bbs1	bbs4	ENSPNYP00000023117	ENSPNYP00000014588	Bardet-Biedl syndrome 1.	Bardet-Biedl syndrome 4.	0.997
bbs1	bbs5	ENSPNYP00000023117	ENSPNYP00000007944	Bardet-Biedl syndrome 1.	Bardet-Biedl syndrome 5 protein homolog; Required for ciliogenesis; Belongs to the BBS5 family.	0.971
bbs1	bbs7	ENSPNYP00000023117	ENSPNYP00000001387	Bardet-Biedl syndrome 1.	Bardet-Biedl syndrome 7.	0.997
bbs1	bbs9	ENSPNYP00000023117	ENSPNYP00000015911	Bardet-Biedl syndrome 1.	Bardet-Biedl syndrome 9.	0.998
bbs1	ttc8	ENSPNYP00000023117	ENSPNYP00000030791	Bardet-Biedl syndrome 1.	Tetratricopeptide repeat domain 8.	0.997
bbs2	ENSPNYP00000002581	ENSPNYP00000016924	ENSPNYP00000002581	Bardet-Biedl syndrome 2 protein homolog.	BBSome interacting protein 1.	0.885
bbs2	bbs1	ENSPNYP00000016924	ENSPNYP00000023117	Bardet-Biedl syndrome 2 protein homolog.	Bardet-Biedl syndrome 1.	0.997
bbs2	bbs4	ENSPNYP00000016924	ENSPNYP00000014588	Bardet-Biedl syndrome 2 protein homolog.	Bardet-Biedl syndrome 4.	0.995
bbs2	bbs5	ENSPNYP00000016924	ENSPNYP00000007944	Bardet-Biedl syndrome 2 protein homolog.	Bardet-Biedl syndrome 5 protein homolog; Required for ciliogenesis; Belongs to the BBS5 family.	0.961
bbs2	bbs7	ENSPNYP00000016924	ENSPNYP00000001387	Bardet-Biedl syndrome 2 protein homolog.	Bardet-Biedl syndrome 7.	0.998
bbs2	bbs9	ENSPNYP00000016924	ENSPNYP00000015911	Bardet-Biedl syndrome 2 protein homolog.	Bardet-Biedl syndrome 9.	0.997