6 items (Pundamilia nyererei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	snrpe	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
	ENSPNYP00000028858	Small nuclear ribonucleoprotein polypeptide F. (85 aa)
	snrpd3	Small nuclear ribonucleoprotein Sm D3. (127 aa)
	clns1a	Chloride channel, nucleotide-sensitive, 1A. (230 aa)
	snrpd1	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (202 aa)
	snrpd2	Small nuclear ribonucleoprotein Sm D2. (118 aa)

Your Current Organism:

Pundamilia nyererei

NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPNYP00000028858	clns1a	ENSPNYP00000028858	ENSPNYP00000028780	Small nuclear ribonucleoprotein polypeptide F.	Chloride channel, nucleotide-sensitive, 1A.	0.956
ENSPNYP00000028858	snrpd1	ENSPNYP00000028858	ENSPNYP00000014413	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.999
ENSPNYP00000028858	snrpd2	ENSPNYP00000028858	ENSPNYP00000015609	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein Sm D2.	0.999
ENSPNYP00000028858	snrpd3	ENSPNYP00000028858	ENSPNYP00000017633	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein Sm D3.	0.999
ENSPNYP00000028858	snrpe	ENSPNYP00000028858	ENSPNYP00000007302	Small nuclear ribonucleoprotein polypeptide F.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
clns1a	ENSPNYP00000028858	ENSPNYP00000028780	ENSPNYP00000028858	Chloride channel, nucleotide-sensitive, 1A.	Small nuclear ribonucleoprotein polypeptide F.	0.956
clns1a	snrpd1	ENSPNYP00000028780	ENSPNYP00000014413	Chloride channel, nucleotide-sensitive, 1A.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.995
clns1a	snrpd2	ENSPNYP00000028780	ENSPNYP00000015609	Chloride channel, nucleotide-sensitive, 1A.	Small nuclear ribonucleoprotein Sm D2.	0.970
clns1a	snrpd3	ENSPNYP00000028780	ENSPNYP00000017633	Chloride channel, nucleotide-sensitive, 1A.	Small nuclear ribonucleoprotein Sm D3.	0.979
clns1a	snrpe	ENSPNYP00000028780	ENSPNYP00000007302	Chloride channel, nucleotide-sensitive, 1A.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.968
snrpd1	ENSPNYP00000028858	ENSPNYP00000014413	ENSPNYP00000028858	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein polypeptide F.	0.999
snrpd1	clns1a	ENSPNYP00000014413	ENSPNYP00000028780	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Chloride channel, nucleotide-sensitive, 1A.	0.995
snrpd1	snrpd2	ENSPNYP00000014413	ENSPNYP00000015609	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein Sm D2.	0.999
snrpd1	snrpd3	ENSPNYP00000014413	ENSPNYP00000017633	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein Sm D3.	0.999
snrpd1	snrpe	ENSPNYP00000014413	ENSPNYP00000007302	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
snrpd2	ENSPNYP00000028858	ENSPNYP00000015609	ENSPNYP00000028858	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein polypeptide F.	0.999
snrpd2	clns1a	ENSPNYP00000015609	ENSPNYP00000028780	Small nuclear ribonucleoprotein Sm D2.	Chloride channel, nucleotide-sensitive, 1A.	0.970
snrpd2	snrpd1	ENSPNYP00000015609	ENSPNYP00000014413	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.999
snrpd2	snrpd3	ENSPNYP00000015609	ENSPNYP00000017633	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein Sm D3.	0.999
snrpd2	snrpe	ENSPNYP00000015609	ENSPNYP00000007302	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999