STRINGSTRING
snrpd1 snrpd1 snrpd2 snrpd2 snrpd3 snrpd3 gemin5 gemin5 ENSPNYP00000028858 ENSPNYP00000028858 gemin2 gemin2 gemin6 gemin6 strap strap ENSPNYP00000020310 ENSPNYP00000020310 snrpb snrpb ddx20 ddx20 LOC102192481 LOC102192481 gemin7 gemin7 snrpe snrpe snrpg snrpg gemin4 gemin4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
snrpd1Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (202 aa)
snrpd2Small nuclear ribonucleoprotein Sm D2. (118 aa)
snrpd3Small nuclear ribonucleoprotein Sm D3. (127 aa)
gemin5Gem (nuclear organelle) associated protein 5. (1419 aa)
ENSPNYP00000028858Small nuclear ribonucleoprotein polypeptide F. (85 aa)
gemin2Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. (266 aa)
gemin6Gem (nuclear organelle) associated protein 6. (169 aa)
strapSerine/threonine kinase receptor associated protein. (329 aa)
ENSPNYP00000020310Gem (nuclear organelle) associated protein 8. (201 aa)
snrpbSmall nuclear ribonucleoprotein-associated protein. (240 aa)
ddx20DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family. (792 aa)
LOC102192481Survival of motor neuron 1, telomeric. (282 aa)
gemin7Gem (nuclear organelle) associated protein 7. (128 aa)
snrpeSmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
snrpgSmall nuclear ribonucleoprotein G. (76 aa)
gemin4Gem (nuclear organelle) associated protein 4. (1114 aa)
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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