57 items (Pundamilia nyererei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	adrb2	Adrenoceptor beta 2, surface a; Belongs to the G-protein coupled receptor 1 family. (417 aa)
	LOC102204710	C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (437 aa)
	bbs7	Bardet-Biedl syndrome 7. (704 aa)
	LOC102209184	Uncharacterized protein. (995 aa)
	LOC102203499	Aldedh domain-containing protein. (525 aa)
	ENSPNYP00000002042	Bardet-Biedl syndrome 12. (630 aa)
	adrb1	Adrenoceptor beta 1. (397 aa)
	LOC102210678	Nuclear receptor subfamily 4, group A, member 2b. (600 aa)
	LOC102209804	Nuclear receptor subfamily 4, group A, member 1. (575 aa)
	ENSPNYP00000003807	G_PROTEIN_RECEP_F2_4 domain-containing protein. (333 aa)
	LOC102208154	Placenta associated 8, tandem duplicate 2. (104 aa)
	sirt1	Deacetylase sirtuin-type domain-containing protein. (695 aa)
	LOC102210571	E1A binding protein p300 a. (2779 aa)
	LOC102199986	Uncharacterized protein. (1151 aa)
	ENSPNYP00000005989	Uncharacterized protein. (131 aa)
	ENSPNYP00000006194	Si:dkey-211g8.6. (311 aa)
	trim32	Tripartite motif containing 32. (693 aa)
	prdm16	Si:ch211-263k4.2. (1125 aa)
	LOC102195879	Transmembrane protein 120B. (324 aa)
	ENSPNYP00000012710	Uncharacterized protein. (158 aa)
	tmem120a	Transmembrane protein 120A. (314 aa)
	cntn2	Contactin 2. (1024 aa)
	bbs4	Bardet-Biedl syndrome 4. (503 aa)
	ENSPNYP00000014672	Uncharacterized protein. (84 aa)
	ENSPNYP00000014984	Laminin N-terminal domain-containing protein. (108 aa)
	bbs9	Bardet-Biedl syndrome 9. (765 aa)
	ffar4	G_PROTEIN_RECEP_F1_2 domain-containing protein. (294 aa)
	LOC102193772	G_PROTEIN_RECEP_F1_2 domain-containing protein. (335 aa)
	nr4a2	Uncharacterized protein. (581 aa)
	LOC102201657	Zgc:103681. (340 aa)
	ENSPNYP00000017132	Uncharacterized protein. (894 aa)
	ENSPNYP00000017202	Uncharacterized protein. (590 aa)
	LOC102212809	CCAAT enhancer binding protein beta. (292 aa)
	ptgs2	Prostaglandin-endoperoxide synthase 2b. (578 aa)
	mkks	McKusick-Kaufman syndrome. (565 aa)
	ENSPNYP00000019516	Uncharacterized protein. (89 aa)
	cebpd	CCAAT/enhancer-binding protein. (293 aa)
	fam120b	Family with sequence similarity 120B. (748 aa)
	dhrs7b	Dehydrogenase/reductase (SDR family) member 7B; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (330 aa)
	hmga2	Uncharacterized protein. (114 aa)
	LOC102213573	STEAP family member 4. (448 aa)
	steap4	STEAP family member 4. (472 aa)
	bbs1	Bardet-Biedl syndrome 1. (583 aa)
	LOC102193670	Activating transcription factor 5a. (505 aa)
	nr4a3	Nuclear receptor subfamily 4, group A, member 3. (593 aa)
	socs1	Suppressor of cytokine signaling 1a. (215 aa)
	med1	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1833 aa)
	NR4A1	Nuclear receptor subfamily 4 group A member 1. (592 aa)
	ENSPNYP00000026235	Reticulophagy regulator 1. (234 aa)
	ctbp1	C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (443 aa)
	LOC102214420	BSCL2 lipid droplet biogenesis associated, seipin. (385 aa)
	LOC102205611	Uncharacterized protein. (332 aa)
	LOC102205890	LRRCT domain-containing protein. (334 aa)
	aldh6a1	Aldehyde dehydrogenase 6 family member A1. (526 aa)
	ttc8	Tetratricopeptide repeat domain 8. (475 aa)
	LOC102213167	E1A binding protein p300 b. (2553 aa)
	LOC102210209	Activating transcription factor 5b. (505 aa)

Your Current Organism:

Pundamilia nyererei

NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPNYP00000002042	bbs1	ENSPNYP00000002042	ENSPNYP00000023117	Bardet-Biedl syndrome 12.	Bardet-Biedl syndrome 1.	0.707
ENSPNYP00000002042	bbs4	ENSPNYP00000002042	ENSPNYP00000014588	Bardet-Biedl syndrome 12.	Bardet-Biedl syndrome 4.	0.701
ENSPNYP00000002042	bbs7	ENSPNYP00000002042	ENSPNYP00000001387	Bardet-Biedl syndrome 12.	Bardet-Biedl syndrome 7.	0.825
ENSPNYP00000002042	bbs9	ENSPNYP00000002042	ENSPNYP00000015911	Bardet-Biedl syndrome 12.	Bardet-Biedl syndrome 9.	0.719
ENSPNYP00000002042	mkks	ENSPNYP00000002042	ENSPNYP00000019383	Bardet-Biedl syndrome 12.	McKusick-Kaufman syndrome.	0.909
ENSPNYP00000002042	trim32	ENSPNYP00000002042	ENSPNYP00000011998	Bardet-Biedl syndrome 12.	Tripartite motif containing 32.	0.469
ENSPNYP00000002042	ttc8	ENSPNYP00000002042	ENSPNYP00000030791	Bardet-Biedl syndrome 12.	Tetratricopeptide repeat domain 8.	0.632
ENSPNYP00000005989	med1	ENSPNYP00000005989	ENSPNYP00000025495	Uncharacterized protein.	Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.655
ENSPNYP00000006194	ffar4	ENSPNYP00000006194	ENSPNYP00000016322	Si:dkey-211g8.6.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.420
ENSPNYP00000012710	ENSPNYP00000017132	ENSPNYP00000012710	ENSPNYP00000017132	Uncharacterized protein.	Uncharacterized protein.	0.905
ENSPNYP00000012710	ENSPNYP00000017202	ENSPNYP00000012710	ENSPNYP00000017202	Uncharacterized protein.	Uncharacterized protein.	0.905
ENSPNYP00000012710	LOC102199986	ENSPNYP00000012710	ENSPNYP00000005262	Uncharacterized protein.	Uncharacterized protein.	0.460
ENSPNYP00000012710	LOC102204710	ENSPNYP00000012710	ENSPNYP00000000385	Uncharacterized protein.	C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.460
ENSPNYP00000012710	LOC102209184	ENSPNYP00000012710	ENSPNYP00000001965	Uncharacterized protein.	Uncharacterized protein.	0.460
ENSPNYP00000012710	LOC102210571	ENSPNYP00000012710	ENSPNYP00000005232	Uncharacterized protein.	E1A binding protein p300 a.	0.420
ENSPNYP00000012710	LOC102212809	ENSPNYP00000012710	ENSPNYP00000017386	Uncharacterized protein.	CCAAT enhancer binding protein beta.	0.672
ENSPNYP00000012710	LOC102213167	ENSPNYP00000012710	ENSPNYP00000031881	Uncharacterized protein.	E1A binding protein p300 b.	0.420
ENSPNYP00000012710	ctbp1	ENSPNYP00000012710	ENSPNYP00000027395	Uncharacterized protein.	C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.460
ENSPNYP00000017132	ENSPNYP00000012710	ENSPNYP00000017132	ENSPNYP00000012710	Uncharacterized protein.	Uncharacterized protein.	0.905
ENSPNYP00000017132	LOC102199986	ENSPNYP00000017132	ENSPNYP00000005262	Uncharacterized protein.	Uncharacterized protein.	0.557