27 items (Pundamilia nyererei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ino80c	INO80 complex subunit C. (203 aa)
	taf6	TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (638 aa)
	tex10	Testis expressed 10. (943 aa)
	chd8	Chromodomain-helicase-DNA-binding protein 8; DNA helicase that acts as a chromatin remodeling factor and regulates transcription. Acts as a transcription repressor by remodeling chromatin structure and recruiting histone H1 to target genes. Suppresses p53/TP53-mediated apoptosis by recruiting histone H1 and preventing p53/TP53 transactivation activity. Acts as a negative regulator of Wnt signaling pathway by regulating beta-catenin (CTNNB1) activity. Negatively regulates CTNNB1-targeted gene expression by being recruited specifically to the promoter regions of several CTNNB1 responsive [...] (2519 aa)
	ENSPNYP00000024628	Uncharacterized protein. (273 aa)
	phf20	PHD finger protein 20, a. (951 aa)
	ash2l	Ash2 like, histone lysine methyltransferase complex subunit. (590 aa)
	rnf2	Ring finger protein 2. (342 aa)
	mcrs1	Microspherule protein 1. (466 aa)
	ENSPNYP00000026964	Uncharacterized protein. (289 aa)
	ruvbl2	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (459 aa)
	MAX	MYC associated factor X. (150 aa)
	rbbp5	Retinoblastoma binding protein 5. (578 aa)
	RING1	Ring finger protein 1. (395 aa)
	LOC102211021	Si:ch211-195d17.2. (386 aa)
	LOC102207849	Zgc:103508. (205 aa)
	ENSPNYP00000001687	Uncharacterized protein. (245 aa)
	ENSPNYP00000006417	Uncharacterized protein. (156 aa)
	prpf31	PRP31 pre-mRNA processing factor 31 homolog (yeast). (507 aa)
	LOC102202766	Myc associated factor X. (184 aa)
	LOC102198965	Uncharacterized protein. (170 aa)
	men1	Multiple endocrine neoplasia I. (568 aa)
	dpy30	Dpy-30 histone methyltransferase complex regulatory subunit. (104 aa)
	LOC102197833	BHLH domain-containing protein. (2787 aa)
	hcfc2	Host cell factor C2. (761 aa)
	ruvbl1	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (456 aa)
	pelp1	Proline, glutamate and leucine rich protein 1. (1036 aa)

Your Current Organism:

Pundamilia nyererei

NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPNYP00000001687	LOC102202766	ENSPNYP00000001687	ENSPNYP00000000667	Uncharacterized protein.	Myc associated factor X.	0.882
ENSPNYP00000001687	LOC102211021	ENSPNYP00000001687	ENSPNYP00000001507	Uncharacterized protein.	Si:ch211-195d17.2.	0.887
ENSPNYP00000001687	MAX	ENSPNYP00000001687	ENSPNYP00000029350	Uncharacterized protein.	MYC associated factor X.	0.882
ENSPNYP00000001687	RING1	ENSPNYP00000001687	ENSPNYP00000030787	Uncharacterized protein.	Ring finger protein 1.	0.687
ENSPNYP00000001687	rnf2	ENSPNYP00000001687	ENSPNYP00000026606	Uncharacterized protein.	Ring finger protein 2.	0.687
ENSPNYP00000006417	ENSPNYP00000024628	ENSPNYP00000006417	ENSPNYP00000024628	Uncharacterized protein.	Uncharacterized protein.	0.825
ENSPNYP00000006417	ENSPNYP00000026964	ENSPNYP00000006417	ENSPNYP00000026964	Uncharacterized protein.	Uncharacterized protein.	0.825
ENSPNYP00000006417	ash2l	ENSPNYP00000006417	ENSPNYP00000025657	Uncharacterized protein.	Ash2 like, histone lysine methyltransferase complex subunit.	0.658
ENSPNYP00000006417	chd8	ENSPNYP00000006417	ENSPNYP00000023987	Uncharacterized protein.	Chromodomain-helicase-DNA-binding protein 8; DNA helicase that acts as a chromatin remodeling factor and regulates transcription. Acts as a transcription repressor by remodeling chromatin structure and recruiting histone H1 to target genes. Suppresses p53/TP53-mediated apoptosis by recruiting histone H1 and preventing p53/TP53 transactivation activity. Acts as a negative regulator of Wnt signaling pathway by regulating beta-catenin (CTNNB1) activity. Negatively regulates CTNNB1-targeted gene expression by being recruited specifically to the promoter regions of several CTNNB1 responsive [...]	0.559
ENSPNYP00000006417	hcfc2	ENSPNYP00000006417	ENSPNYP00000020685	Uncharacterized protein.	Host cell factor C2.	0.825
ENSPNYP00000006417	mcrs1	ENSPNYP00000006417	ENSPNYP00000026929	Uncharacterized protein.	Microspherule protein 1.	0.948
ENSPNYP00000006417	rbbp5	ENSPNYP00000006417	ENSPNYP00000029446	Uncharacterized protein.	Retinoblastoma binding protein 5.	0.707
ENSPNYP00000024628	ENSPNYP00000006417	ENSPNYP00000024628	ENSPNYP00000006417	Uncharacterized protein.	Uncharacterized protein.	0.825
ENSPNYP00000024628	ENSPNYP00000026964	ENSPNYP00000024628	ENSPNYP00000026964	Uncharacterized protein.	Uncharacterized protein.	0.878
ENSPNYP00000024628	LOC102202766	ENSPNYP00000024628	ENSPNYP00000000667	Uncharacterized protein.	Myc associated factor X.	0.514
ENSPNYP00000024628	MAX	ENSPNYP00000024628	ENSPNYP00000029350	Uncharacterized protein.	MYC associated factor X.	0.514
ENSPNYP00000024628	ash2l	ENSPNYP00000024628	ENSPNYP00000025657	Uncharacterized protein.	Ash2 like, histone lysine methyltransferase complex subunit.	0.912
ENSPNYP00000024628	dpy30	ENSPNYP00000024628	ENSPNYP00000021166	Uncharacterized protein.	Dpy-30 histone methyltransferase complex regulatory subunit.	0.722
ENSPNYP00000024628	hcfc2	ENSPNYP00000024628	ENSPNYP00000020685	Uncharacterized protein.	Host cell factor C2.	0.873
ENSPNYP00000024628	mcrs1	ENSPNYP00000024628	ENSPNYP00000026929	Uncharacterized protein.	Microspherule protein 1.	0.846