STRINGSTRING
ppil1 ppil1 rpl10 rpl10 tbc1d23 tbc1d23 ift140 ift140 LOC102194065 LOC102194065 mks1 mks1 cdc40 cdc40 LOC102207214 LOC102207214
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ppil1Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (166 aa)
rpl10Ribosomal protein L10. (215 aa)
tbc1d23TBC1 domain family, member 23. (653 aa)
ift140Intraflagellar transport 140 homolog (Chlamydomonas). (1139 aa)
LOC102194065Homeobox protein engrailed-like. (284 aa)
mks1MKS transition zone complex subunit 1. (556 aa)
cdc40Cell division cycle 40 homolog (S. cerevisiae). (581 aa)
LOC102207214Homeobox protein engrailed-like. (226 aa)
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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