6 items (Pundamilia nyererei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	snrpe	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
	snrpg	Small nuclear ribonucleoprotein G. (76 aa)
	snrpd1	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (202 aa)
	ENSPNYP00000015818	Ig-like domain-containing protein. (182 aa)
	snrpd3	Small nuclear ribonucleoprotein Sm D3. (127 aa)
	snrpb	Small nuclear ribonucleoprotein-associated protein. (240 aa)

Your Current Organism:

Pundamilia nyererei

NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPNYP00000015818	snrpd1	ENSPNYP00000015818	ENSPNYP00000014413	Ig-like domain-containing protein.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.965
ENSPNYP00000015818	snrpd3	ENSPNYP00000015818	ENSPNYP00000017633	Ig-like domain-containing protein.	Small nuclear ribonucleoprotein Sm D3.	0.987
ENSPNYP00000015818	snrpe	ENSPNYP00000015818	ENSPNYP00000007302	Ig-like domain-containing protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.988
ENSPNYP00000015818	snrpg	ENSPNYP00000015818	ENSPNYP00000011810	Ig-like domain-containing protein.	Small nuclear ribonucleoprotein G.	0.984
snrpb	snrpd1	ENSPNYP00000019566	ENSPNYP00000014413	Small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.995
snrpb	snrpd3	ENSPNYP00000019566	ENSPNYP00000017633	Small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein Sm D3.	0.996
snrpb	snrpe	ENSPNYP00000019566	ENSPNYP00000007302	Small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.996
snrpb	snrpg	ENSPNYP00000019566	ENSPNYP00000011810	Small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein G.	0.995
snrpd1	ENSPNYP00000015818	ENSPNYP00000014413	ENSPNYP00000015818	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Ig-like domain-containing protein.	0.965
snrpd1	snrpb	ENSPNYP00000014413	ENSPNYP00000019566	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein-associated protein.	0.995
snrpd1	snrpd3	ENSPNYP00000014413	ENSPNYP00000017633	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein Sm D3.	0.999
snrpd1	snrpe	ENSPNYP00000014413	ENSPNYP00000007302	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
snrpd1	snrpg	ENSPNYP00000014413	ENSPNYP00000011810	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein G.	0.999
snrpd3	ENSPNYP00000015818	ENSPNYP00000017633	ENSPNYP00000015818	Small nuclear ribonucleoprotein Sm D3.	Ig-like domain-containing protein.	0.987
snrpd3	snrpb	ENSPNYP00000017633	ENSPNYP00000019566	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein-associated protein.	0.996
snrpd3	snrpd1	ENSPNYP00000017633	ENSPNYP00000014413	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.999
snrpd3	snrpe	ENSPNYP00000017633	ENSPNYP00000007302	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
snrpd3	snrpg	ENSPNYP00000017633	ENSPNYP00000011810	Small nuclear ribonucleoprotein Sm D3.	Small nuclear ribonucleoprotein G.	0.999
snrpe	ENSPNYP00000015818	ENSPNYP00000007302	ENSPNYP00000015818	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Ig-like domain-containing protein.	0.988
snrpe	snrpb	ENSPNYP00000007302	ENSPNYP00000019566	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein-associated protein.	0.996