16 items (Pundamilia nyererei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rpl32	Ribosomal protein L32. (135 aa)
	rpl9	Ribosomal protein L9. (109 aa)
	rpl35a	Ribosomal protein L35a. (113 aa)
	rpl10	Ribosomal protein L10. (215 aa)
	LOC102201356	Ribosomal protein L26. (187 aa)
	rpl15	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
	rpl6	Ribosomal protein L6. (308 aa)
	zcchc17	Zinc finger, CCHC domain containing 17. (248 aa)
	rpl30	Ribosomal protein L30. (116 aa)
	RPL19	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (196 aa)
	rplp1	Ribosomal protein, large, P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
	rpl4	Ribosomal protein L4. (369 aa)
	rpl31	Ribosomal protein L31. (124 aa)
	RPL19-2	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (197 aa)
	rpl29	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (64 aa)
	rpl18a	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (176 aa)

Your Current Organism:

Pundamilia nyererei

NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102201356	RPL19	ENSPNYP00000000222	ENSPNYP00000016682	Ribosomal protein L26.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.998
LOC102201356	RPL19-2	ENSPNYP00000000222	ENSPNYP00000025422	Ribosomal protein L26.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.998
LOC102201356	rpl10	ENSPNYP00000000222	ENSPNYP00000031945	Ribosomal protein L26.	Ribosomal protein L10.	0.999
LOC102201356	rpl15	ENSPNYP00000000222	ENSPNYP00000001090	Ribosomal protein L26.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.999
LOC102201356	rpl18a	ENSPNYP00000000222	ENSPNYP00000030142	Ribosomal protein L26.	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	0.999
LOC102201356	rpl29	ENSPNYP00000000222	ENSPNYP00000025812	Ribosomal protein L26.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.999
LOC102201356	rpl30	ENSPNYP00000000222	ENSPNYP00000016048	Ribosomal protein L26.	Ribosomal protein L30.	0.999
LOC102201356	rpl31	ENSPNYP00000000222	ENSPNYP00000021134	Ribosomal protein L26.	Ribosomal protein L31.	0.999
LOC102201356	rpl32	ENSPNYP00000000222	ENSPNYP00000004500	Ribosomal protein L26.	Ribosomal protein L32.	0.999
LOC102201356	rpl35a	ENSPNYP00000000222	ENSPNYP00000030832	Ribosomal protein L26.	Ribosomal protein L35a.	0.999
LOC102201356	rpl4	ENSPNYP00000000222	ENSPNYP00000018573	Ribosomal protein L26.	Ribosomal protein L4.	0.999
LOC102201356	rpl6	ENSPNYP00000000222	ENSPNYP00000010702	Ribosomal protein L26.	Ribosomal protein L6.	0.999
LOC102201356	rpl9	ENSPNYP00000000222	ENSPNYP00000030723	Ribosomal protein L26.	Ribosomal protein L9.	0.999
LOC102201356	rplp1	ENSPNYP00000000222	ENSPNYP00000017495	Ribosomal protein L26.	Ribosomal protein, large, P1; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.999
RPL19	LOC102201356	ENSPNYP00000016682	ENSPNYP00000000222	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	Ribosomal protein L26.	0.998
RPL19	RPL19-2	ENSPNYP00000016682	ENSPNYP00000025422	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.821
RPL19	rpl10	ENSPNYP00000016682	ENSPNYP00000031945	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	Ribosomal protein L10.	0.993
RPL19	rpl15	ENSPNYP00000016682	ENSPNYP00000001090	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.997
RPL19	rpl18a	ENSPNYP00000016682	ENSPNYP00000030142	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	0.997
RPL19	rpl29	ENSPNYP00000016682	ENSPNYP00000025812	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.997