60 items (Pundamilia nyererei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rps7	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (186 aa)
	rpsa	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (370 aa)
	rps26	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (135 aa)
	fau	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
	LOC102207392	Apolipoprotein Db; Belongs to the calycin superfamily. Lipocalin family. (182 aa)
	LOC102207678	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (180 aa)
	LOC102198418	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (182 aa)
	ENSPNYP00000003474	Uncharacterized protein. (80 aa)
	rps28	Ribosomal protein S28. (69 aa)
	rps15	Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (142 aa)
	RPL7A	Ribosomal protein L7a. (281 aa)
	rpl32	Ribosomal protein L32. (135 aa)
	rpl21	Ribosomal protein L21. (160 aa)
	rps2	Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (279 aa)
	ENSPNYP00000006040	Ribosomal protein L36. (87 aa)
	rpl28	Ribosomal protein L28. (137 aa)
	ENSPNYP00000006418	Uncharacterized protein. (53 aa)
	ENSPNYP00000006682	Ribosomal_S10 domain-containing protein. (79 aa)
	rpl35	Ribosomal protein L35. (123 aa)
	dhx29	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. (1321 aa)
	rps6	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (251 aa)
	rpl6	Ribosomal protein L6. (308 aa)
	LOC102209340	Apolipoprotein Da, duplicate 1; Belongs to the calycin superfamily. Lipocalin family. (188 aa)
	LOC102200238	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family. (106 aa)
	rps11	Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (161 aa)
	zcchc17	Zinc finger, CCHC domain containing 17. (248 aa)
	RPS19	Ribosomal protein S19. (140 aa)
	mcts1	Malignant T-cell-amplified sequence. (183 aa)
	LOC102194362	Ribosomal protein S17. (134 aa)
	rps13	Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	RPL27A	Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family. (148 aa)
	rps24	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (132 aa)
	RPS20	Ribosomal_S10 domain-containing protein. (119 aa)
	rps25	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (123 aa)
	rpl30	Ribosomal protein L30. (116 aa)
	RPL19	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (196 aa)
	rpl13	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (211 aa)
	rps23	Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
	rplp1	Ribosomal protein, large, P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
	rps3a	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (266 aa)
	rpl4	Ribosomal protein L4. (369 aa)
	LOC102192408	Ribosomal protein S19. (155 aa)
	rpl31	Ribosomal protein L31. (124 aa)
	rps5	Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (203 aa)
	ENSPNYP00000022109	Uncharacterized protein. (106 aa)
	rpl24	Ribosomal protein L24. (157 aa)
	LOC102196403	Uncharacterized protein. (134 aa)
	rps16	Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (146 aa)
	ENSPNYP00000025156	Uncharacterized protein. (82 aa)
	RPL19-2	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (197 aa)
	rpl29	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (64 aa)
	LOC102200763	40S ribosomal protein S27. (84 aa)
	rpl18a	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (176 aa)
	rpl9	Ribosomal protein L9. (109 aa)
	rps18	Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (152 aa)
	rpl35a	Ribosomal protein L35a. (113 aa)
	RPL34	Ribosomal protein L34. (116 aa)
	rpl10	Ribosomal protein L10. (215 aa)
	LOC102201356	Ribosomal protein L26. (187 aa)
	rpl15	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)

Your Current Organism:

Pundamilia nyererei

NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPNYP00000003474	ENSPNYP00000006040	ENSPNYP00000003474	ENSPNYP00000006040	Uncharacterized protein.	Ribosomal protein L36.	0.999
ENSPNYP00000003474	ENSPNYP00000006418	ENSPNYP00000003474	ENSPNYP00000006418	Uncharacterized protein.	Uncharacterized protein.	0.992
ENSPNYP00000003474	ENSPNYP00000006682	ENSPNYP00000003474	ENSPNYP00000006682	Uncharacterized protein.	Ribosomal_S10 domain-containing protein.	0.997
ENSPNYP00000003474	ENSPNYP00000022109	ENSPNYP00000003474	ENSPNYP00000022109	Uncharacterized protein.	Uncharacterized protein.	0.997
ENSPNYP00000003474	ENSPNYP00000025156	ENSPNYP00000003474	ENSPNYP00000025156	Uncharacterized protein.	Uncharacterized protein.	0.997
ENSPNYP00000003474	LOC102192408	ENSPNYP00000003474	ENSPNYP00000019434	Uncharacterized protein.	Ribosomal protein S19.	0.997
ENSPNYP00000003474	LOC102194362	ENSPNYP00000003474	ENSPNYP00000014276	Uncharacterized protein.	Ribosomal protein S17.	0.994
ENSPNYP00000003474	LOC102196403	ENSPNYP00000003474	ENSPNYP00000023628	Uncharacterized protein.	Uncharacterized protein.	0.994
ENSPNYP00000003474	LOC102200238	ENSPNYP00000003474	ENSPNYP00000012172	Uncharacterized protein.	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family.	0.999
ENSPNYP00000003474	LOC102200763	ENSPNYP00000003474	ENSPNYP00000029050	Uncharacterized protein.	40S ribosomal protein S27.	0.994
ENSPNYP00000003474	LOC102201356	ENSPNYP00000003474	ENSPNYP00000000222	Uncharacterized protein.	Ribosomal protein L26.	0.999
ENSPNYP00000003474	RPL19	ENSPNYP00000003474	ENSPNYP00000016682	Uncharacterized protein.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.994
ENSPNYP00000003474	RPL19-2	ENSPNYP00000003474	ENSPNYP00000025422	Uncharacterized protein.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.994
ENSPNYP00000003474	RPL27A	ENSPNYP00000003474	ENSPNYP00000014855	Uncharacterized protein.	Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.	0.999
ENSPNYP00000003474	RPL34	ENSPNYP00000003474	ENSPNYP00000031540	Uncharacterized protein.	Ribosomal protein L34.	0.992
ENSPNYP00000003474	RPL7A	ENSPNYP00000003474	ENSPNYP00000004392	Uncharacterized protein.	Ribosomal protein L7a.	0.999
ENSPNYP00000003474	RPS19	ENSPNYP00000003474	ENSPNYP00000012897	Uncharacterized protein.	Ribosomal protein S19.	0.997
ENSPNYP00000003474	RPS20	ENSPNYP00000003474	ENSPNYP00000015247	Uncharacterized protein.	Ribosomal_S10 domain-containing protein.	0.997
ENSPNYP00000003474	fau	ENSPNYP00000003474	ENSPNYP00000002628	Uncharacterized protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
ENSPNYP00000003474	mcts1	ENSPNYP00000003474	ENSPNYP00000013319	Uncharacterized protein.	Malignant T-cell-amplified sequence.	0.743