STRINGSTRING
DDX41 DDX41 rbm22 rbm22 dhx35 dhx35 crnkl1 crnkl1 prpf4b prpf4b hnrnpc hnrnpc ENSPNYP00000006596 ENSPNYP00000006596 ppwd1 ppwd1 mtrex mtrex cactin cactin ppie ppie ENSPNYP00000011626 ENSPNYP00000011626 ess2 ess2 ENSPNYP00000012475 ENSPNYP00000012475 snrnp40 snrnp40 cwc22 cwc22 cdc40 cdc40 eftud2 eftud2 rbmx rbmx dhx38 dhx38 xab2 xab2 wdr83 wdr83 sart3 sart3 mthfsd mthfsd aqr aqr snrnp200 snrnp200 gpatch1 gpatch1 WDR25 WDR25 cwc15 cwc15 EFL1 EFL1 ppil1 ppil1 ddx23 ddx23 snw1 snw1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DDX41DEAD-box helicase 41. (614 aa)
rbm22RNA binding motif protein 22. (363 aa)
dhx35DEAH-box helicase 35. (699 aa)
crnkl1Crooked neck pre-mRNA splicing factor 1. (755 aa)
prpf4bPre-mRNA processing factor 4Bb. (1014 aa)
hnrnpcRRM domain-containing protein. (298 aa)
ENSPNYP00000006596PWI domain-containing protein. (238 aa)
ppwd1Peptidylprolyl isomerase domain and WD repeat containing 1. (626 aa)
mtrexMtr4 exosome RNA helicase. (1037 aa)
cactinCactin. (731 aa)
ppiePeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (299 aa)
ENSPNYP00000011626Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (162 aa)
ess2Ess-2 splicing factor homolog. (476 aa)
ENSPNYP00000012475Cwf21 domain-containing protein. (187 aa)
snrnp40Small nuclear ribonucleoprotein 40 (U5). (347 aa)
cwc22CWC22 spliceosome associated protein homolog. (687 aa)
cdc40Cell division cycle 40 homolog (S. cerevisiae). (581 aa)
eftud2Elongation factor Tu GTP binding domain containing 2. (971 aa)
rbmxRNA binding motif protein X-linked. (391 aa)
dhx38DEAH (Asp-Glu-Ala-His) box polypeptide 38. (1242 aa)
xab2XPA binding protein 2. (849 aa)
wdr83WD repeat domain containing 83. (317 aa)
sart3Spliceosome associated factor 3, U4/U6 recycling protein. (950 aa)
mthfsdMethenyltetrahydrofolate synthetase domain containing. (396 aa)
aqrAquarius intron-binding spliceosomal factor. (1472 aa)
snrnp200Small nuclear ribonucleoprotein 200 (U5). (2063 aa)
gpatch1G patch domain containing 1. (889 aa)
WDR25WD repeat domain 25. (503 aa)
cwc15CWC15 spliceosome associated protein homolog. (237 aa)
EFL1Elongation factor like GTPase 1. (1067 aa)
ppil1Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (166 aa)
ddx23DEAD (Asp-Glu-Ala-Asp) box polypeptide 23. (832 aa)
snw1SNW domain containing 1. (536 aa)
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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