4 items (Pundamilia nyererei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	epm2a	EPM2A glucan phosphatase, laforin. (316 aa)
	rps28	Ribosomal protein S28. (69 aa)
	ENSPNYP00000003474	Uncharacterized protein. (80 aa)
	rps26	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (135 aa)

Your Current Organism:

Pundamilia nyererei

NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPNYP00000003474	rps26	ENSPNYP00000003474	ENSPNYP00000002279	Uncharacterized protein.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.999
ENSPNYP00000003474	rps28	ENSPNYP00000003474	ENSPNYP00000004074	Uncharacterized protein.	Ribosomal protein S28.	0.999
rps26	ENSPNYP00000003474	ENSPNYP00000002279	ENSPNYP00000003474	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	Uncharacterized protein.	0.999
rps26	rps28	ENSPNYP00000002279	ENSPNYP00000004074	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	Ribosomal protein S28.	0.999
rps28	ENSPNYP00000003474	ENSPNYP00000004074	ENSPNYP00000003474	Ribosomal protein S28.	Uncharacterized protein.	0.999
rps28	rps26	ENSPNYP00000004074	ENSPNYP00000002279	Ribosomal protein S28.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.999