(6 nodes) Cyclin-dependent kinase inhibitor domain superfamily network (Pundamilia nyererei)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102213633	Cyclin-dependent kinase inhibitor 1Cb. (208 aa)
	ENSPNYP00000002795	Uncharacterized protein. (183 aa)
	LOC102205859	Uncharacterized protein. (178 aa)
	LOC102206726	Uncharacterized protein. (181 aa)
	cdkn1b	Cyclin-dependent kinase inhibitor 1Bb. (184 aa)
	LOC102192516	Cyclin-dependent kinase inhibitor 1A. (169 aa)

Your Current Organism:

Pundamilia nyererei

NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPNYP00000002795	LOC102213633	ENSPNYP00000002795	ENSPNYP00000010548	Uncharacterized protein.	Cyclin-dependent kinase inhibitor 1Cb.	0.845
LOC102192516	cdkn1b	ENSPNYP00000010096	ENSPNYP00000009667	Cyclin-dependent kinase inhibitor 1A.	Cyclin-dependent kinase inhibitor 1Bb.	0.667
LOC102205859	cdkn1b	ENSPNYP00000008669	ENSPNYP00000009667	Uncharacterized protein.	Cyclin-dependent kinase inhibitor 1Bb.	0.861
LOC102213633	ENSPNYP00000002795	ENSPNYP00000010548	ENSPNYP00000002795	Cyclin-dependent kinase inhibitor 1Cb.	Uncharacterized protein.	0.845
cdkn1b	LOC102192516	ENSPNYP00000009667	ENSPNYP00000010096	Cyclin-dependent kinase inhibitor 1Bb.	Cyclin-dependent kinase inhibitor 1A.	0.667
cdkn1b	LOC102205859	ENSPNYP00000009667	ENSPNYP00000008669	Cyclin-dependent kinase inhibitor 1Bb.	Uncharacterized protein.	0.861