26 items (Pundamilia nyererei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rps27a	Ribosomal protein S27a. (188 aa)
	ncor2	Nuclear receptor corepressor 2. (2271 aa)
	snw1	SNW domain containing 1. (536 aa)
	LOC102198470	Mothers against decapentaplegic homolog. (577 aa)
	ncor1	Nuclear receptor corepressor 1. (2311 aa)
	LOC106456278	Ubiquitin-like domain-containing protein. (122 aa)
	ENSPNYP00000005212	Ubiquitin-like domain-containing protein. (114 aa)
	ski	V-ski avian sarcoma viral oncogene homolog a. (715 aa)
	LOC102206956	Mothers against decapentaplegic homolog. (503 aa)
	ENSPNYP00000006974	Homeobox domain-containing protein. (211 aa)
	mapk1	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (334 aa)
	LOC102193897	TGFB-induced factor homeobox 1. (309 aa)
	nedd4l	E3 ubiquitin-protein ligase. (806 aa)
	SMAD3	Mothers against decapentaplegic homolog. (425 aa)
	LOC102206904	V-ski avian sarcoma viral oncogene homolog b. (686 aa)
	LOC102209716	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (394 aa)
	uba52	Ubiquitin-like domain-containing protein. (128 aa)
	trim33	Tripartite motif containing 33. (1095 aa)
	smad3	Mothers against decapentaplegic homolog. (415 aa)
	LOC102195606	Ubiquitin specific peptidase 9; Belongs to the peptidase C19 family. (2528 aa)
	LOC102201366	Mothers against decapentaplegic homolog. (510 aa)
	smad2	Mothers against decapentaplegic homolog. (472 aa)
	atp1b4	Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family. (338 aa)
	parp1	Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (999 aa)
	skil	SKI-like proto-oncogene a. (766 aa)
	LOC102207094	Mothers against decapentaplegic homolog. (467 aa)

Your Current Organism:

Pundamilia nyererei

NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPNYP00000005212	LOC102195606	ENSPNYP00000005212	ENSPNYP00000014252	Ubiquitin-like domain-containing protein.	Ubiquitin specific peptidase 9; Belongs to the peptidase C19 family.	0.656
ENSPNYP00000005212	LOC102209716	ENSPNYP00000005212	ENSPNYP00000022591	Ubiquitin-like domain-containing protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.513
ENSPNYP00000005212	mapk1	ENSPNYP00000005212	ENSPNYP00000007060	Ubiquitin-like domain-containing protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.513
ENSPNYP00000005212	ncor1	ENSPNYP00000005212	ENSPNYP00000023484	Ubiquitin-like domain-containing protein.	Nuclear receptor corepressor 1.	0.643
ENSPNYP00000005212	ncor2	ENSPNYP00000005212	ENSPNYP00000027343	Ubiquitin-like domain-containing protein.	Nuclear receptor corepressor 2.	0.643
ENSPNYP00000005212	nedd4l	ENSPNYP00000005212	ENSPNYP00000009833	Ubiquitin-like domain-containing protein.	E3 ubiquitin-protein ligase.	0.746
ENSPNYP00000005212	rps27a	ENSPNYP00000005212	ENSPNYP00000026531	Ubiquitin-like domain-containing protein.	Ribosomal protein S27a.	0.996
ENSPNYP00000005212	trim33	ENSPNYP00000005212	ENSPNYP00000019323	Ubiquitin-like domain-containing protein.	Tripartite motif containing 33.	0.450
ENSPNYP00000006974	LOC102193897	ENSPNYP00000006974	ENSPNYP00000008757	Homeobox domain-containing protein.	TGFB-induced factor homeobox 1.	0.827
ENSPNYP00000006974	LOC102198470	ENSPNYP00000006974	ENSPNYP00000025953	Homeobox domain-containing protein.	Mothers against decapentaplegic homolog.	0.606
ENSPNYP00000006974	LOC102201366	ENSPNYP00000006974	ENSPNYP00000013790	Homeobox domain-containing protein.	Mothers against decapentaplegic homolog.	0.606
ENSPNYP00000006974	LOC102206956	ENSPNYP00000006974	ENSPNYP00000010707	Homeobox domain-containing protein.	Mothers against decapentaplegic homolog.	0.606
ENSPNYP00000006974	LOC102207094	ENSPNYP00000006974	ENSPNYP00000010875	Homeobox domain-containing protein.	Mothers against decapentaplegic homolog.	0.878
ENSPNYP00000006974	SMAD3	ENSPNYP00000006974	ENSPNYP00000010407	Homeobox domain-containing protein.	Mothers against decapentaplegic homolog.	0.870
ENSPNYP00000006974	smad2	ENSPNYP00000006974	ENSPNYP00000013222	Homeobox domain-containing protein.	Mothers against decapentaplegic homolog.	0.744
ENSPNYP00000006974	smad3	ENSPNYP00000006974	ENSPNYP00000019172	Homeobox domain-containing protein.	Mothers against decapentaplegic homolog.	0.863
LOC102193897	ENSPNYP00000006974	ENSPNYP00000008757	ENSPNYP00000006974	TGFB-induced factor homeobox 1.	Homeobox domain-containing protein.	0.827
LOC102193897	LOC102198470	ENSPNYP00000008757	ENSPNYP00000025953	TGFB-induced factor homeobox 1.	Mothers against decapentaplegic homolog.	0.606
LOC102193897	LOC102201366	ENSPNYP00000008757	ENSPNYP00000013790	TGFB-induced factor homeobox 1.	Mothers against decapentaplegic homolog.	0.606
LOC102193897	LOC102206956	ENSPNYP00000008757	ENSPNYP00000010707	TGFB-induced factor homeobox 1.	Mothers against decapentaplegic homolog.	0.606