21 items (Pundamilia nyererei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102199155	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (73 aa)
	ENSPNYP00000024756	Cyclic nucleotide gated channel beta 1a. (721 aa)
	LOC102199909	Cyclic nucleotide gated channel subunit alpha 3a. (680 aa)
	LOC102195275	Guanine nucleotide binding protein (G protein), beta polypeptide 1b. (340 aa)
	LOC102214189	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1. (353 aa)
	LOC102200526	Rhodopsin. (353 aa)
	LOC102199788	Rhodopsin. (352 aa)
	LOC102200243	Rhodopsin. (348 aa)
	LOC102192503	Phosphodiesterase. (852 aa)
	gnb1	Guanine nucleotide binding protein (G protein), beta polypeptide 1a. (340 aa)
	RHO	Rhodopsin. (360 aa)
	ENSPNYP00000006695	Rhodopsin. (364 aa)
	LOC102200557	Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog a. (90 aa)
	pde6a	Phosphodiesterase. (857 aa)
	pde6c	Phosphodiesterase. (711 aa)
	LOC102206085	Cyclic nucleotide gated channel subunit alpha 1b. (522 aa)
	LOC102214703	cGMP-gated cation channel alpha-1-like. (522 aa)
	LOC102203196	Cyclic nucleotide gated channel beta 3, tandem duplicate 2. (644 aa)
	LOC102202908	Cyclic nucleotide gated channel beta 3, tandem duplicate 1. (724 aa)
	pde6g	Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b. (101 aa)
	ENSPNYP00000025842	Si:dkey-44k1.5. (794 aa)

Your Current Organism:

Pundamilia nyererei

NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPNYP00000006695	ENSPNYP00000024756	ENSPNYP00000006695	ENSPNYP00000024756	Rhodopsin.	Cyclic nucleotide gated channel beta 1a.	0.400
ENSPNYP00000006695	ENSPNYP00000025842	ENSPNYP00000006695	ENSPNYP00000025842	Rhodopsin.	Si:dkey-44k1.5.	0.400
ENSPNYP00000006695	LOC102195275	ENSPNYP00000006695	ENSPNYP00000022103	Rhodopsin.	Guanine nucleotide binding protein (G protein), beta polypeptide 1b.	0.937
ENSPNYP00000006695	LOC102199155	ENSPNYP00000006695	ENSPNYP00000025757	Rhodopsin.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.954
ENSPNYP00000006695	LOC102199788	ENSPNYP00000006695	ENSPNYP00000018511	Rhodopsin.	Rhodopsin.	0.810
ENSPNYP00000006695	LOC102200243	ENSPNYP00000006695	ENSPNYP00000018488	Rhodopsin.	Rhodopsin.	0.811
ENSPNYP00000006695	LOC102200526	ENSPNYP00000006695	ENSPNYP00000018539	Rhodopsin.	Rhodopsin.	0.810
ENSPNYP00000006695	LOC102202908	ENSPNYP00000006695	ENSPNYP00000027771	Rhodopsin.	Cyclic nucleotide gated channel beta 3, tandem duplicate 1.	0.400
ENSPNYP00000006695	LOC102203196	ENSPNYP00000006695	ENSPNYP00000027808	Rhodopsin.	Cyclic nucleotide gated channel beta 3, tandem duplicate 2.	0.400
ENSPNYP00000006695	LOC102214189	ENSPNYP00000006695	ENSPNYP00000021330	Rhodopsin.	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.	0.961
ENSPNYP00000006695	RHO	ENSPNYP00000006695	ENSPNYP00000013340	Rhodopsin.	Rhodopsin.	0.863
ENSPNYP00000006695	gnb1	ENSPNYP00000006695	ENSPNYP00000016021	Rhodopsin.	Guanine nucleotide binding protein (G protein), beta polypeptide 1a.	0.941
ENSPNYP00000024756	ENSPNYP00000006695	ENSPNYP00000024756	ENSPNYP00000006695	Cyclic nucleotide gated channel beta 1a.	Rhodopsin.	0.400
ENSPNYP00000024756	LOC102192503	ENSPNYP00000024756	ENSPNYP00000016099	Cyclic nucleotide gated channel beta 1a.	Phosphodiesterase.	0.400
ENSPNYP00000024756	LOC102199788	ENSPNYP00000024756	ENSPNYP00000018511	Cyclic nucleotide gated channel beta 1a.	Rhodopsin.	0.400
ENSPNYP00000024756	LOC102199909	ENSPNYP00000024756	ENSPNYP00000024354	Cyclic nucleotide gated channel beta 1a.	Cyclic nucleotide gated channel subunit alpha 3a.	0.881
ENSPNYP00000024756	LOC102200243	ENSPNYP00000024756	ENSPNYP00000018488	Cyclic nucleotide gated channel beta 1a.	Rhodopsin.	0.400
ENSPNYP00000024756	LOC102200526	ENSPNYP00000024756	ENSPNYP00000018539	Cyclic nucleotide gated channel beta 1a.	Rhodopsin.	0.400
ENSPNYP00000024756	LOC102206085	ENSPNYP00000024756	ENSPNYP00000002098	Cyclic nucleotide gated channel beta 1a.	Cyclic nucleotide gated channel subunit alpha 1b.	0.872
ENSPNYP00000024756	LOC102214189	ENSPNYP00000024756	ENSPNYP00000021330	Cyclic nucleotide gated channel beta 1a.	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.	0.659