12 items (Pundamilia nyererei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102198636	TANK-binding kinase 1. (723 aa)
	trim13	Tripartite motif containing 13. (402 aa)
	LOC102204062	Interferon regulatory factor 3. (465 aa)
	LOC106456278	Ubiquitin-like domain-containing protein. (122 aa)
	uba52	Ubiquitin-like domain-containing protein. (128 aa)
	rps27a	Ribosomal protein S27a. (188 aa)
	sting1	Transmembrane protein 173. (396 aa)
	DDX41	DEAD-box helicase 41. (614 aa)
	ENSPNYP00000005212	Ubiquitin-like domain-containing protein. (114 aa)
	LOC102205369	Uncharacterized protein. (593 aa)
	LOC102195364	Deltex 4, E3 ubiquitin ligase a. (602 aa)
	trim32	Tripartite motif containing 32. (693 aa)

Your Current Organism:

Pundamilia nyererei

NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DDX41	LOC102198636	ENSPNYP00000000285	ENSPNYP00000012929	DEAD-box helicase 41.	TANK-binding kinase 1.	0.557
DDX41	LOC102204062	ENSPNYP00000000285	ENSPNYP00000018996	DEAD-box helicase 41.	Interferon regulatory factor 3.	0.607
DDX41	sting1	ENSPNYP00000000285	ENSPNYP00000000102	DEAD-box helicase 41.	Transmembrane protein 173.	0.683
DDX41	trim13	ENSPNYP00000000285	ENSPNYP00000018047	DEAD-box helicase 41.	Tripartite motif containing 13.	0.415
DDX41	trim32	ENSPNYP00000000285	ENSPNYP00000011998	DEAD-box helicase 41.	Tripartite motif containing 32.	0.469
ENSPNYP00000005212	LOC102195364	ENSPNYP00000005212	ENSPNYP00000007543	Ubiquitin-like domain-containing protein.	Deltex 4, E3 ubiquitin ligase a.	0.498
ENSPNYP00000005212	LOC102198636	ENSPNYP00000005212	ENSPNYP00000012929	Ubiquitin-like domain-containing protein.	TANK-binding kinase 1.	0.641
ENSPNYP00000005212	LOC102205369	ENSPNYP00000005212	ENSPNYP00000006852	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.498
ENSPNYP00000005212	rps27a	ENSPNYP00000005212	ENSPNYP00000026531	Ubiquitin-like domain-containing protein.	Ribosomal protein S27a.	0.996
ENSPNYP00000005212	trim13	ENSPNYP00000005212	ENSPNYP00000018047	Ubiquitin-like domain-containing protein.	Tripartite motif containing 13.	0.424
ENSPNYP00000005212	trim32	ENSPNYP00000005212	ENSPNYP00000011998	Ubiquitin-like domain-containing protein.	Tripartite motif containing 32.	0.541
LOC102195364	ENSPNYP00000005212	ENSPNYP00000007543	ENSPNYP00000005212	Deltex 4, E3 ubiquitin ligase a.	Ubiquitin-like domain-containing protein.	0.498
LOC102195364	LOC106456278	ENSPNYP00000007543	ENSPNYP00000023328	Deltex 4, E3 ubiquitin ligase a.	Ubiquitin-like domain-containing protein.	0.498
LOC102195364	rps27a	ENSPNYP00000007543	ENSPNYP00000026531	Deltex 4, E3 ubiquitin ligase a.	Ribosomal protein S27a.	0.738
LOC102195364	uba52	ENSPNYP00000007543	ENSPNYP00000021999	Deltex 4, E3 ubiquitin ligase a.	Ubiquitin-like domain-containing protein.	0.498
LOC102198636	DDX41	ENSPNYP00000012929	ENSPNYP00000000285	TANK-binding kinase 1.	DEAD-box helicase 41.	0.557
LOC102198636	ENSPNYP00000005212	ENSPNYP00000012929	ENSPNYP00000005212	TANK-binding kinase 1.	Ubiquitin-like domain-containing protein.	0.641
LOC102198636	LOC102204062	ENSPNYP00000012929	ENSPNYP00000018996	TANK-binding kinase 1.	Interferon regulatory factor 3.	0.985
LOC102198636	LOC106456278	ENSPNYP00000012929	ENSPNYP00000023328	TANK-binding kinase 1.	Ubiquitin-like domain-containing protein.	0.641
LOC102198636	rps27a	ENSPNYP00000012929	ENSPNYP00000026531	TANK-binding kinase 1.	Ribosomal protein S27a.	0.737