46 items (Pundamilia nyererei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	nup35	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (301 aa)
	ENSPNYP00000031608	Uncharacterized protein. (591 aa)
	ENSPNYP00000031601	Peptidase S59 domain-containing protein. (633 aa)
	ENSPNYP00000031599	Peptidase S59 domain-containing protein. (191 aa)
	nup133	Nucleoporin 133. (1135 aa)
	nup50	Nucleoporin 50. (468 aa)
	nup37	Nucleoporin 37. (323 aa)
	nup58	Nucleoporin 58. (538 aa)
	sumo1	Small ubiquitin-related modifier. (101 aa)
	nup42	Nucleoporin 42. (438 aa)
	nup205	Nucleoporin 205. (1949 aa)
	rae1	Ribonucleic acid export 1. (369 aa)
	nup93	Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (664 aa)
	aaas	Achalasia, adrenocortical insufficiency, alacrimia. (502 aa)
	ENSPNYP00000023928	Uncharacterized protein. (512 aa)
	LOC102212740	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
	ube2i	Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
	nup107	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (908 aa)
	ENSPNYP00000022768	Serine protease; Belongs to the peptidase S1B family. (511 aa)
	ENSPNYP00000022743	Uncharacterized protein. (510 aa)
	pias4	Protein inhibitor of activated STAT, 4a. (507 aa)
	ranbp2	RAN binding protein 2. (3058 aa)
	LOC102212432	Small ubiquitin-related modifier. (96 aa)
	LOC102203776	Small ubiquitin-related modifier. (94 aa)
	nup85	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (652 aa)
	tpr	Translocated promoter region b, nuclear basket protein. (2160 aa)
	LOC102205074	Translocated promoter region a, nuclear basket protein. (1949 aa)
	ENSPNYP00000016873	RING-type domain-containing protein. (743 aa)
	ENSPNYP00000014352	Uncharacterized protein. (564 aa)
	ENSPNYP00000012509	RING-type domain-containing protein. (93 aa)
	pom121	POM121 transmembrane nucleoporin. (1110 aa)
	sec13	SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (331 aa)
	nup155	Nucleoporin 155. (1365 aa)
	nup88	Nucleoporin 88. (719 aa)
	nup62	Nsp1_C domain-containing protein. (560 aa)
	ranbp3	RAN binding protein 3b. (518 aa)
	ndc1	NDC1 transmembrane nucleoporin. (666 aa)
	nup160	Nucleoporin 160. (1181 aa)
	seh1l	SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family. (415 aa)
	nup210	Nucleoporin 210. (1791 aa)
	ENSPNYP00000005294	Nup96 domain-containing protein. (306 aa)
	nup188	Nucleoporin 188. (1704 aa)
	ENSPNYP00000002289	Uncharacterized protein. (352 aa)
	LOC102207357	Small ubiquitin-related modifier. (94 aa)
	nup43	Nucleoporin 43. (372 aa)
	ENSPNYP00000000447	Uncharacterized protein. (64 aa)

Your Current Organism:

Pundamilia nyererei

NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPNYP00000000447	ENSPNYP00000002289	ENSPNYP00000000447	ENSPNYP00000002289	Uncharacterized protein.	Uncharacterized protein.	0.672
ENSPNYP00000000447	ENSPNYP00000005294	ENSPNYP00000000447	ENSPNYP00000005294	Uncharacterized protein.	Nup96 domain-containing protein.	0.672
ENSPNYP00000000447	ENSPNYP00000012509	ENSPNYP00000000447	ENSPNYP00000012509	Uncharacterized protein.	RING-type domain-containing protein.	0.777
ENSPNYP00000000447	ENSPNYP00000016873	ENSPNYP00000000447	ENSPNYP00000016873	Uncharacterized protein.	RING-type domain-containing protein.	0.777
ENSPNYP00000000447	ENSPNYP00000031599	ENSPNYP00000000447	ENSPNYP00000031599	Uncharacterized protein.	Peptidase S59 domain-containing protein.	0.672
ENSPNYP00000000447	ENSPNYP00000031601	ENSPNYP00000000447	ENSPNYP00000031601	Uncharacterized protein.	Peptidase S59 domain-containing protein.	0.672
ENSPNYP00000000447	LOC102203776	ENSPNYP00000000447	ENSPNYP00000020349	Uncharacterized protein.	Small ubiquitin-related modifier.	0.929
ENSPNYP00000000447	LOC102205074	ENSPNYP00000000447	ENSPNYP00000017076	Uncharacterized protein.	Translocated promoter region a, nuclear basket protein.	0.657
ENSPNYP00000000447	LOC102207357	ENSPNYP00000000447	ENSPNYP00000001884	Uncharacterized protein.	Small ubiquitin-related modifier.	0.929
ENSPNYP00000000447	LOC102212432	ENSPNYP00000000447	ENSPNYP00000020873	Uncharacterized protein.	Small ubiquitin-related modifier.	0.929
ENSPNYP00000000447	aaas	ENSPNYP00000000447	ENSPNYP00000025056	Uncharacterized protein.	Achalasia, adrenocortical insufficiency, alacrimia.	0.718
ENSPNYP00000000447	ndc1	ENSPNYP00000000447	ENSPNYP00000008917	Uncharacterized protein.	NDC1 transmembrane nucleoporin.	0.725
ENSPNYP00000000447	nup107	ENSPNYP00000000447	ENSPNYP00000022877	Uncharacterized protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.766
ENSPNYP00000000447	nup133	ENSPNYP00000000447	ENSPNYP00000031129	Uncharacterized protein.	Nucleoporin 133.	0.725
ENSPNYP00000000447	nup155	ENSPNYP00000000447	ENSPNYP00000010464	Uncharacterized protein.	Nucleoporin 155.	0.725
ENSPNYP00000000447	nup205	ENSPNYP00000000447	ENSPNYP00000027291	Uncharacterized protein.	Nucleoporin 205.	0.725
ENSPNYP00000000447	nup210	ENSPNYP00000000447	ENSPNYP00000006737	Uncharacterized protein.	Nucleoporin 210.	0.715
ENSPNYP00000000447	nup35	ENSPNYP00000000447	ENSPNYP00000016502	Uncharacterized protein.	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.	0.728
ENSPNYP00000000447	nup37	ENSPNYP00000000447	ENSPNYP00000029408	Uncharacterized protein.	Nucleoporin 37.	0.722
ENSPNYP00000000447	nup42	ENSPNYP00000000447	ENSPNYP00000027954	Uncharacterized protein.	Nucleoporin 42.	0.436