46 items (Pundamilia nyererei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	vcp	Valosin containing protein; Belongs to the AAA ATPase family. (806 aa)
	LOC102197578	Ring finger protein 139. (550 aa)
	uggt1	UDP-glucose glycoprotein glucosyltransferase 1. (1538 aa)
	ganab	Glucosidase, alpha; neutral AB; Belongs to the glycosyl hydrolase 31 family. (907 aa)
	ubxn1	UBX domain protein 1. (311 aa)
	marchf11	Membrane-associated ring finger (C3HC4) 11. (349 aa)
	LOC102202748	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (888 aa)
	canx	Calnexin. (609 aa)
	edem1	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (636 aa)
	uba52	Ubiquitin-like domain-containing protein. (128 aa)
	LOC106456278	Ubiquitin-like domain-containing protein. (122 aa)
	man1b1	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (685 aa)
	amfr	Autocrine motility factor receptor b. (623 aa)
	marchf2	Membrane-associated ring finger (C3HC4) 2. (253 aa)
	LOC102193152	RING-CH-type domain-containing protein. (255 aa)
	rps27a	Ribosomal protein S27a. (188 aa)
	LOC102207159	RING-CH-type domain-containing protein. (927 aa)
	psmc1	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family. (440 aa)
	LOC102215279	Membrane-associated ring finger (C3HC4) 9. (342 aa)
	pdia4	Protein disulfide-isomerase A4; Belongs to the protein disulfide isomerase family. (639 aa)
	engase	Endo-beta-N-acetylglucosaminidase. (708 aa)
	spata5l1	Spermatogenesis associated 5-like 1. (734 aa)
	ENSPNYP00000011207	Ubiquitin-like domain-containing protein. (128 aa)
	marchf8	Membrane-associated ring finger (C3HC4) 8. (282 aa)
	LOC102192544	Calreticulin. (395 aa)
	ENSPNYP00000018504	Membrane-associated ring finger (C3HC4) 1. (501 aa)
	LOC102202758	Calreticulin. (422 aa)
	rnf103	Ring finger protein 103. (701 aa)
	edem2	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (539 aa)
	LOC102198640	Zgc:136908; Belongs to the AAA ATPase family. (806 aa)
	LOC102196754	RING-CH-type domain-containing protein. (248 aa)
	ENSPNYP00000005212	Ubiquitin-like domain-containing protein. (114 aa)
	clgn	Calmegin. (680 aa)
	calr3	Calreticulin. (414 aa)
	ENSPNYP00000004143	RING-CH-type domain-containing protein. (85 aa)
	kxd1	KxDL motif containing 1. (184 aa)
	SPATA5	Spermatogenesis associated 5. (828 aa)
	ngly1	N-glycanase 1. (637 aa)
	marchf4	Membrane-associated ring finger (C3HC4) 4. (416 aa)
	marchf7	Membrane-associated ring finger (C3HC4) 7. (783 aa)
	marchf6	Membrane-associated ring finger (C3HC4) 6. (915 aa)
	pdia3	Protein disulfide-isomerase. (492 aa)
	mogs	Mannosyl-oligosaccharide glucosidase. (844 aa)
	derl1	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. (252 aa)
	LOC102202558	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (857 aa)
	uggt2	UDP-glucose glycoprotein glucosyltransferase 2. (1522 aa)

Your Current Organism:

Pundamilia nyererei

NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPNYP00000004143	LOC102198640	ENSPNYP00000004143	ENSPNYP00000005469	RING-CH-type domain-containing protein.	Zgc:136908; Belongs to the AAA ATPase family.	0.543
ENSPNYP00000004143	SPATA5	ENSPNYP00000004143	ENSPNYP00000002170	RING-CH-type domain-containing protein.	Spermatogenesis associated 5.	0.543
ENSPNYP00000004143	marchf11	ENSPNYP00000004143	ENSPNYP00000021208	RING-CH-type domain-containing protein.	Membrane-associated ring finger (C3HC4) 11.	0.402
ENSPNYP00000004143	spata5l1	ENSPNYP00000004143	ENSPNYP00000011305	RING-CH-type domain-containing protein.	Spermatogenesis associated 5-like 1.	0.543
ENSPNYP00000004143	vcp	ENSPNYP00000004143	ENSPNYP00000024301	RING-CH-type domain-containing protein.	Valosin containing protein; Belongs to the AAA ATPase family.	0.543
ENSPNYP00000005212	ENSPNYP00000011207	ENSPNYP00000005212	ENSPNYP00000011207	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.912
ENSPNYP00000005212	LOC102197578	ENSPNYP00000005212	ENSPNYP00000031563	Ubiquitin-like domain-containing protein.	Ring finger protein 139.	0.646
ENSPNYP00000005212	LOC102198640	ENSPNYP00000005212	ENSPNYP00000005469	Ubiquitin-like domain-containing protein.	Zgc:136908; Belongs to the AAA ATPase family.	0.838
ENSPNYP00000005212	SPATA5	ENSPNYP00000005212	ENSPNYP00000002170	Ubiquitin-like domain-containing protein.	Spermatogenesis associated 5.	0.838
ENSPNYP00000005212	amfr	ENSPNYP00000005212	ENSPNYP00000024706	Ubiquitin-like domain-containing protein.	Autocrine motility factor receptor b.	0.847
ENSPNYP00000005212	psmc1	ENSPNYP00000005212	ENSPNYP00000029289	Ubiquitin-like domain-containing protein.	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family.	0.949
ENSPNYP00000005212	rnf103	ENSPNYP00000005212	ENSPNYP00000006971	Ubiquitin-like domain-containing protein.	Ring finger protein 103.	0.625
ENSPNYP00000005212	rps27a	ENSPNYP00000005212	ENSPNYP00000026531	Ubiquitin-like domain-containing protein.	Ribosomal protein S27a.	0.996
ENSPNYP00000005212	spata5l1	ENSPNYP00000005212	ENSPNYP00000011305	Ubiquitin-like domain-containing protein.	Spermatogenesis associated 5-like 1.	0.838
ENSPNYP00000005212	ubxn1	ENSPNYP00000005212	ENSPNYP00000020358	Ubiquitin-like domain-containing protein.	UBX domain protein 1.	0.660
ENSPNYP00000005212	vcp	ENSPNYP00000005212	ENSPNYP00000024301	Ubiquitin-like domain-containing protein.	Valosin containing protein; Belongs to the AAA ATPase family.	0.838
ENSPNYP00000011207	ENSPNYP00000005212	ENSPNYP00000011207	ENSPNYP00000005212	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.912
ENSPNYP00000011207	LOC102192544	ENSPNYP00000011207	ENSPNYP00000009858	Ubiquitin-like domain-containing protein.	Calreticulin.	0.526
ENSPNYP00000011207	LOC102197578	ENSPNYP00000011207	ENSPNYP00000031563	Ubiquitin-like domain-containing protein.	Ring finger protein 139.	0.688
ENSPNYP00000011207	LOC102198640	ENSPNYP00000011207	ENSPNYP00000005469	Ubiquitin-like domain-containing protein.	Zgc:136908; Belongs to the AAA ATPase family.	0.820