64 items (Pundamilia nyererei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102199716	Proteasome subunit beta 12. (217 aa)
	LOC102200259	Proteasome subunit beta. (216 aa)
	LOC102212057	Proteasome subunit beta11b. (362 aa)
	skp1	S-phase kinase-associated protein 1; Belongs to the SKP1 family. (163 aa)
	psme1	Proteasome activator subunit 1. (301 aa)
	psma8	Proteasome subunit alpha type. (251 aa)
	ENSPNYP00000017722	Cullin 1b; Belongs to the cullin family. (370 aa)
	psma2	Proteasome subunit alpha type. (234 aa)
	gli1	GLI family zinc finger 1. (1469 aa)
	psmd9	Proteasome 26S subunit, non-ATPase 9. (212 aa)
	psmc6	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family. (389 aa)
	itch	E3 ubiquitin-protein ligase. (888 aa)
	LOC102197382	Proteasome subunit beta 6. (221 aa)
	uba52	Ubiquitin-like domain-containing protein. (128 aa)
	psmc3	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family. (427 aa)
	psmb1	Proteasome subunit beta. (237 aa)
	LOC106456278	Ubiquitin-like domain-containing protein. (122 aa)
	psma5	Proteasome subunit alpha type. (241 aa)
	psmd3	Proteasome 26S subunit, non-ATPase 3. (562 aa)
	psmd12	Proteasome 26S subunit, non-ATPase 12. (456 aa)
	psmc2	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family. (433 aa)
	psme4	Proteasome activator subunit 4a. (1847 aa)
	PSMD11	PCI domain-containing protein. (422 aa)
	ENSPNYP00000025540	Proteasome subunit beta. (288 aa)
	LOC102196183	Proteasome subunit beta. (281 aa)
	rps27a	Ribosomal protein S27a. (188 aa)
	psmd1	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family. (951 aa)
	ENSPNYP00000028654	Uncharacterized protein. (295 aa)
	LOC102199978	Proteasome subunit alpha type. (246 aa)
	psmc1	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family. (440 aa)
	psme2	Proteasome activator subunit 2. (245 aa)
	psmc4	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family. (417 aa)
	psma6	Proteasome subunit alpha type. (246 aa)
	ENSPNYP00000031825	Proteasome 26S subunit, non-ATPase 10. (138 aa)
	rbx1	Ring-box 1, E3 ubiquitin protein ligase. (107 aa)
	psmd8	Proteasome 26S subunit, non-ATPase 8. (265 aa)
	psmd13	Proteasome 26S subunit, non-ATPase 13. (378 aa)
	LOC102195379	E3 ubiquitin-protein ligase. (864 aa)
	LOC102205309	Proteasome subunit beta. (278 aa)
	LOC102214802	Proteasome activator subunit 4b. (1804 aa)
	LOC102206931	NUMB like endocytic adaptor protein. (737 aa)
	psmb2	Proteasome subunit beta. (199 aa)
	psmb3	Proteasome subunit beta. (205 aa)
	psmb4	Proteasome subunit beta; Belongs to the peptidase T1B family. (259 aa)
	psmb7	Proteasome subunit beta. (286 aa)
	LOC102207966	Proteasome 26S subunit, non-ATPase 4b. (375 aa)
	psmd5	Proteasome 26S subunit, non-ATPase 5. (504 aa)
	psme3	Proteasome activator subunit 3. (256 aa)
	ENSPNYP00000000172	ANK_REP_REGION domain-containing protein. (102 aa)
	psmd14	Proteasome 26S subunit, non-ATPase 14. (310 aa)
	ENSPNYP00000005212	Ubiquitin-like domain-containing protein. (114 aa)
	psmd7	Proteasome 26S subunit, non-ATPase 7. (332 aa)
	ENSPNYP00000004124	Proteasome inhibitor subunit 1. (236 aa)
	LOC102209997	Proteasome 26S subunit, non-ATPase 11b. (422 aa)
	psmd6	Proteasome 26S subunit, non-ATPase 6. (392 aa)
	LOC102205503	Proteasome subunit alpha type. (248 aa)
	psma3	Proteasome subunit alpha type. (255 aa)
	sufu	Suppressor of fused homolog (Drosophila). (441 aa)
	LOC102203937	Proteasome 26S subunit, non-ATPase 4a. (377 aa)
	numb	NUMB endocytic adaptor protein. (637 aa)
	psma4	Proteasome subunit alpha type. (261 aa)
	psmc5	Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family. (407 aa)
	psma1	Proteasome subunit alpha type. (263 aa)
	psmb8	Proteasome subunit beta. (279 aa)

Your Current Organism:

Pundamilia nyererei

NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPNYP00000000172	ENSPNYP00000005212	ENSPNYP00000000172	ENSPNYP00000005212	ANK_REP_REGION domain-containing protein.	Ubiquitin-like domain-containing protein.	0.482
ENSPNYP00000000172	ENSPNYP00000017722	ENSPNYP00000000172	ENSPNYP00000017722	ANK_REP_REGION domain-containing protein.	Cullin 1b; Belongs to the cullin family.	0.640
ENSPNYP00000000172	ENSPNYP00000028654	ENSPNYP00000000172	ENSPNYP00000028654	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.920
ENSPNYP00000000172	LOC102195379	ENSPNYP00000000172	ENSPNYP00000009377	ANK_REP_REGION domain-containing protein.	E3 ubiquitin-protein ligase.	0.438
ENSPNYP00000000172	LOC102199978	ENSPNYP00000000172	ENSPNYP00000029212	ANK_REP_REGION domain-containing protein.	Proteasome subunit alpha type.	0.443
ENSPNYP00000000172	LOC102203937	ENSPNYP00000000172	ENSPNYP00000013148	ANK_REP_REGION domain-containing protein.	Proteasome 26S subunit, non-ATPase 4a.	0.923
ENSPNYP00000000172	LOC102205503	ENSPNYP00000000172	ENSPNYP00000001971	ANK_REP_REGION domain-containing protein.	Proteasome subunit alpha type.	0.443
ENSPNYP00000000172	LOC102207966	ENSPNYP00000000172	ENSPNYP00000007426	ANK_REP_REGION domain-containing protein.	Proteasome 26S subunit, non-ATPase 4b.	0.923
ENSPNYP00000000172	LOC102209997	ENSPNYP00000000172	ENSPNYP00000001492	ANK_REP_REGION domain-containing protein.	Proteasome 26S subunit, non-ATPase 11b.	0.921
ENSPNYP00000000172	LOC106456278	ENSPNYP00000000172	ENSPNYP00000023328	ANK_REP_REGION domain-containing protein.	Ubiquitin-like domain-containing protein.	0.482
ENSPNYP00000000172	PSMD11	ENSPNYP00000000172	ENSPNYP00000025506	ANK_REP_REGION domain-containing protein.	PCI domain-containing protein.	0.921
ENSPNYP00000000172	gli1	ENSPNYP00000000172	ENSPNYP00000018054	ANK_REP_REGION domain-containing protein.	GLI family zinc finger 1.	0.404
ENSPNYP00000000172	itch	ENSPNYP00000000172	ENSPNYP00000020120	ANK_REP_REGION domain-containing protein.	E3 ubiquitin-protein ligase.	0.438
ENSPNYP00000000172	psma1	ENSPNYP00000000172	ENSPNYP00000014706	ANK_REP_REGION domain-containing protein.	Proteasome subunit alpha type.	0.533
ENSPNYP00000000172	psma2	ENSPNYP00000000172	ENSPNYP00000018005	ANK_REP_REGION domain-containing protein.	Proteasome subunit alpha type.	0.516
ENSPNYP00000000172	psma3	ENSPNYP00000000172	ENSPNYP00000012075	ANK_REP_REGION domain-containing protein.	Proteasome subunit alpha type.	0.450
ENSPNYP00000000172	psma4	ENSPNYP00000000172	ENSPNYP00000014131	ANK_REP_REGION domain-containing protein.	Proteasome subunit alpha type.	0.450
ENSPNYP00000000172	psma5	ENSPNYP00000000172	ENSPNYP00000023555	ANK_REP_REGION domain-containing protein.	Proteasome subunit alpha type.	0.445
ENSPNYP00000000172	psma6	ENSPNYP00000000172	ENSPNYP00000030169	ANK_REP_REGION domain-containing protein.	Proteasome subunit alpha type.	0.443
ENSPNYP00000000172	psma8	ENSPNYP00000000172	ENSPNYP00000017221	ANK_REP_REGION domain-containing protein.	Proteasome subunit alpha type.	0.565