17 items (Pundamilia nyererei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	bbs7	Bardet-Biedl syndrome 7. (704 aa)
	ENSPNYP00000002042	Bardet-Biedl syndrome 12. (630 aa)
	lztfl1	Leucine zipper transcription factor-like 1. (282 aa)
	ARL6	ADP-ribosylation factor-like 6; Belongs to the small GTPase superfamily. Arf family. (169 aa)
	bbs5	Bardet-Biedl syndrome 5 protein homolog; Required for ciliogenesis; Belongs to the BBS5 family. (321 aa)
	bbs10	Uncharacterized protein; Belongs to the TCP-1 chaperonin family. (600 aa)
	bbs4	Bardet-Biedl syndrome 4. (503 aa)
	LOC102202888	Somatostatin receptor 3; Belongs to the G-protein coupled receptor 1 family. (392 aa)
	bbs9	Bardet-Biedl syndrome 9. (765 aa)
	bbs2	Bardet-Biedl syndrome 2 protein homolog. (689 aa)
	mkks	McKusick-Kaufman syndrome. (565 aa)
	LOC102212918	Melanin-concentrating hormone receptor 1a. (357 aa)
	LOC102206528	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (200 aa)
	bbs1	Bardet-Biedl syndrome 1. (583 aa)
	smo	Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. (703 aa)
	ENSPNYP00000028069	Melanin-concentrating hormone receptor 1b. (334 aa)
	ttc8	Tetratricopeptide repeat domain 8. (475 aa)

Your Current Organism:

Pundamilia nyererei

NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARL6	bbs1	ENSPNYP00000005223	ENSPNYP00000023117	ADP-ribosylation factor-like 6; Belongs to the small GTPase superfamily. Arf family.	Bardet-Biedl syndrome 1.	0.761
ARL6	bbs2	ENSPNYP00000005223	ENSPNYP00000016924	ADP-ribosylation factor-like 6; Belongs to the small GTPase superfamily. Arf family.	Bardet-Biedl syndrome 2 protein homolog.	0.731
ARL6	bbs4	ENSPNYP00000005223	ENSPNYP00000014588	ADP-ribosylation factor-like 6; Belongs to the small GTPase superfamily. Arf family.	Bardet-Biedl syndrome 4.	0.726
ARL6	bbs5	ENSPNYP00000005223	ENSPNYP00000007944	ADP-ribosylation factor-like 6; Belongs to the small GTPase superfamily. Arf family.	Bardet-Biedl syndrome 5 protein homolog; Required for ciliogenesis; Belongs to the BBS5 family.	0.515
ARL6	bbs7	ENSPNYP00000005223	ENSPNYP00000001387	ADP-ribosylation factor-like 6; Belongs to the small GTPase superfamily. Arf family.	Bardet-Biedl syndrome 7.	0.781
ARL6	bbs9	ENSPNYP00000005223	ENSPNYP00000015911	ADP-ribosylation factor-like 6; Belongs to the small GTPase superfamily. Arf family.	Bardet-Biedl syndrome 9.	0.731
ARL6	lztfl1	ENSPNYP00000005223	ENSPNYP00000004394	ADP-ribosylation factor-like 6; Belongs to the small GTPase superfamily. Arf family.	Leucine zipper transcription factor-like 1.	0.607
ARL6	smo	ENSPNYP00000005223	ENSPNYP00000027305	ADP-ribosylation factor-like 6; Belongs to the small GTPase superfamily. Arf family.	Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.	0.526
ARL6	ttc8	ENSPNYP00000005223	ENSPNYP00000030791	ADP-ribosylation factor-like 6; Belongs to the small GTPase superfamily. Arf family.	Tetratricopeptide repeat domain 8.	0.701
ENSPNYP00000002042	bbs1	ENSPNYP00000002042	ENSPNYP00000023117	Bardet-Biedl syndrome 12.	Bardet-Biedl syndrome 1.	0.707
ENSPNYP00000002042	bbs10	ENSPNYP00000002042	ENSPNYP00000012160	Bardet-Biedl syndrome 12.	Uncharacterized protein; Belongs to the TCP-1 chaperonin family.	0.913
ENSPNYP00000002042	bbs2	ENSPNYP00000002042	ENSPNYP00000016924	Bardet-Biedl syndrome 12.	Bardet-Biedl syndrome 2 protein homolog.	0.719
ENSPNYP00000002042	bbs4	ENSPNYP00000002042	ENSPNYP00000014588	Bardet-Biedl syndrome 12.	Bardet-Biedl syndrome 4.	0.701
ENSPNYP00000002042	bbs5	ENSPNYP00000002042	ENSPNYP00000007944	Bardet-Biedl syndrome 12.	Bardet-Biedl syndrome 5 protein homolog; Required for ciliogenesis; Belongs to the BBS5 family.	0.602
ENSPNYP00000002042	bbs7	ENSPNYP00000002042	ENSPNYP00000001387	Bardet-Biedl syndrome 12.	Bardet-Biedl syndrome 7.	0.825
ENSPNYP00000002042	bbs9	ENSPNYP00000002042	ENSPNYP00000015911	Bardet-Biedl syndrome 12.	Bardet-Biedl syndrome 9.	0.719
ENSPNYP00000002042	lztfl1	ENSPNYP00000002042	ENSPNYP00000004394	Bardet-Biedl syndrome 12.	Leucine zipper transcription factor-like 1.	0.530
ENSPNYP00000002042	mkks	ENSPNYP00000002042	ENSPNYP00000019383	Bardet-Biedl syndrome 12.	McKusick-Kaufman syndrome.	0.909
ENSPNYP00000002042	ttc8	ENSPNYP00000002042	ENSPNYP00000030791	Bardet-Biedl syndrome 12.	Tetratricopeptide repeat domain 8.	0.632
ENSPNYP00000028069	LOC102212918	ENSPNYP00000028069	ENSPNYP00000020920	Melanin-concentrating hormone receptor 1b.	Melanin-concentrating hormone receptor 1a.	0.851