17 items (Pundamilia nyererei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSPNYP00000005212	Ubiquitin-like domain-containing protein. (114 aa)
	LOC102196725	Uncharacterized protein. (471 aa)
	kxd1	KxDL motif containing 1. (184 aa)
	josd2	Josephin domain containing 2. (183 aa)
	SPATA5	Spermatogenesis associated 5. (828 aa)
	rps27a	Ribosomal protein S27a. (188 aa)
	LOC102202828	Ataxin 3. (348 aa)
	uba52	Ubiquitin-like domain-containing protein. (128 aa)
	rad23a	RAD23 homolog A, nucleotide excision repair protein a. (396 aa)
	prkn	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (425 aa)
	LOC106456278	Ubiquitin-like domain-containing protein. (122 aa)
	aspdh	Aspartate dehydrogenase domain containing. (278 aa)
	spata5l1	Spermatogenesis associated 5-like 1. (734 aa)
	ENSPNYP00000011207	Ubiquitin-like domain-containing protein. (128 aa)
	LOC102198640	Zgc:136908; Belongs to the AAA ATPase family. (806 aa)
	josd1	Josephin domain containing 1. (264 aa)
	vcp	Valosin containing protein; Belongs to the AAA ATPase family. (806 aa)

Your Current Organism:

Pundamilia nyererei

NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPNYP00000005212	ENSPNYP00000011207	ENSPNYP00000005212	ENSPNYP00000011207	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.912
ENSPNYP00000005212	LOC102196725	ENSPNYP00000005212	ENSPNYP00000004778	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.912
ENSPNYP00000005212	LOC102198640	ENSPNYP00000005212	ENSPNYP00000005469	Ubiquitin-like domain-containing protein.	Zgc:136908; Belongs to the AAA ATPase family.	0.838
ENSPNYP00000005212	LOC102202828	ENSPNYP00000005212	ENSPNYP00000030289	Ubiquitin-like domain-containing protein.	Ataxin 3.	0.860
ENSPNYP00000005212	SPATA5	ENSPNYP00000005212	ENSPNYP00000002170	Ubiquitin-like domain-containing protein.	Spermatogenesis associated 5.	0.838
ENSPNYP00000005212	josd1	ENSPNYP00000005212	ENSPNYP00000005059	Ubiquitin-like domain-containing protein.	Josephin domain containing 1.	0.847
ENSPNYP00000005212	josd2	ENSPNYP00000005212	ENSPNYP00000002326	Ubiquitin-like domain-containing protein.	Josephin domain containing 2.	0.900
ENSPNYP00000005212	prkn	ENSPNYP00000005212	ENSPNYP00000012053	Ubiquitin-like domain-containing protein.	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.	0.972
ENSPNYP00000005212	rad23a	ENSPNYP00000005212	ENSPNYP00000020166	Ubiquitin-like domain-containing protein.	RAD23 homolog A, nucleotide excision repair protein a.	0.912
ENSPNYP00000005212	rps27a	ENSPNYP00000005212	ENSPNYP00000026531	Ubiquitin-like domain-containing protein.	Ribosomal protein S27a.	0.996
ENSPNYP00000005212	spata5l1	ENSPNYP00000005212	ENSPNYP00000011305	Ubiquitin-like domain-containing protein.	Spermatogenesis associated 5-like 1.	0.838
ENSPNYP00000005212	vcp	ENSPNYP00000005212	ENSPNYP00000024301	Ubiquitin-like domain-containing protein.	Valosin containing protein; Belongs to the AAA ATPase family.	0.838
ENSPNYP00000011207	ENSPNYP00000005212	ENSPNYP00000011207	ENSPNYP00000005212	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.912
ENSPNYP00000011207	LOC102196725	ENSPNYP00000011207	ENSPNYP00000004778	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.818
ENSPNYP00000011207	LOC102198640	ENSPNYP00000011207	ENSPNYP00000005469	Ubiquitin-like domain-containing protein.	Zgc:136908; Belongs to the AAA ATPase family.	0.820
ENSPNYP00000011207	LOC102202828	ENSPNYP00000011207	ENSPNYP00000030289	Ubiquitin-like domain-containing protein.	Ataxin 3.	0.872
ENSPNYP00000011207	LOC106456278	ENSPNYP00000011207	ENSPNYP00000023328	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.912
ENSPNYP00000011207	SPATA5	ENSPNYP00000011207	ENSPNYP00000002170	Ubiquitin-like domain-containing protein.	Spermatogenesis associated 5.	0.820
ENSPNYP00000011207	josd1	ENSPNYP00000011207	ENSPNYP00000005059	Ubiquitin-like domain-containing protein.	Josephin domain containing 1.	0.614
ENSPNYP00000011207	josd2	ENSPNYP00000011207	ENSPNYP00000002326	Ubiquitin-like domain-containing protein.	Josephin domain containing 2.	0.643