STRINGSTRING
ENSPNYP00000019396 ENSPNYP00000019396 pias1 pias1 polr2j polr2j ddb2 ddb2 ube2v2 ube2v2 rad23a rad23a LOC102214201 LOC102214201 TCEANC TCEANC LOC102203776 LOC102203776 LOC102201896 LOC102201896 usp40 usp40 LOC102212432 LOC102212432 gtf2h1 gtf2h1 polr2g polr2g pold3 pold3 LOC102215177 LOC102215177 tcea1 tcea1 uba52 uba52 cops8 cops8 aqr aqr pole pole pole2 pole2 ube2i ube2i LOC106456278 LOC106456278 ino80c ino80c LOC102212740 LOC102212740 pold2 pold2 actb actb usp7 usp7 bivm bivm cdk7 cdk7 ENSPNYP00000025590 ENSPNYP00000025590 phf3 phf3 ENSPNYP00000025918 ENSPNYP00000025918 ercc1 ercc1 polr2f polr2f POLR2E POLR2E LOC102204724 LOC102204724 ENSPNYP00000026333 ENSPNYP00000026333 LOC106456478 LOC106456478 LOC102191989 LOC102191989 rps27a rps27a mcrs1 mcrs1 ccnh ccnh cops4 cops4 ENSPNYP00000006869 ENSPNYP00000006869 ruvbl1 ruvbl1 cops3 cops3 parp3 parp3 ppie ppie tceanc2 tceanc2 LOC102202864 LOC102202864 polr2l polr2l pold4 pold4 COPS6 COPS6 cetn3 cetn3 LOC102208280 LOC102208280 gtf2h4 gtf2h4 ercc6 ercc6 cul4b cul4b rcbtb2 rcbtb2 parp1 parp1 actr8 actr8 LOC102213521 LOC102213521 ercc8 ercc8 wbp1 wbp1 ino80d ino80d pcna pcna LOC102193700 LOC102193700 cops2 cops2 pold1 pold1 ENSPNYP00000011207 ENSPNYP00000011207 rfc5 rfc5 LOC102200240 LOC102200240 tfpt tfpt kxd1 kxd1 lig1 lig1 LOC102213342 LOC102213342 YY1 YY1 LOC102207357 LOC102207357 xpa xpa ercc3 ercc3 prpf19 prpf19 LOC102212161 LOC102212161 ENSPNYP00000000447 ENSPNYP00000000447 hmgn5 hmgn5 polr2b polr2b polr2h polr2h meiob meiob sumo1 sumo1 ino80b ino80b LOC102213241 LOC102213241 pole4 pole4 ENSPNYP00000028993 ENSPNYP00000028993 ercc2 ercc2 mnat1 mnat1 polr2a polr2a ino80e ino80e cops7a cops7a LOC102208173 LOC102208173 nrde2 nrde2 rfc1 rfc1 polr2d polr2d LOC102213167 LOC102213167 rbx1 rbx1 RPA1 RPA1 LOC102203234 LOC102203234 rfc2 rfc2 LOC102203518 LOC102203518 LOC102215821 LOC102215821 usp45 usp45 LOC102210571 LOC102210571 ENSPNYP00000005212 ENSPNYP00000005212 polr2c polr2c LOC102196725 LOC102196725 ENSPNYP00000004582 ENSPNYP00000004582 parp2 parp2 ENSPNYP00000004552 ENSPNYP00000004552 ino80 ino80 gps1 gps1 pole3 pole3 ercc4 ercc4 ppp1r42 ppp1r42 cops5 cops5 cul4a cul4a atad5 atad5 xpc xpc rpa3 rpa3 actr5 actr5 polr2i polr2i rpap3 rpap3 rfc4 rfc4 gtf2h5 gtf2h5 polr2k polr2k lig3 lig3 uvssa uvssa ENSPNYP00000016413 ENSPNYP00000016413 xrcc1 xrcc1 ENSPNYP00000006853 ENSPNYP00000006853 chd1l chd1l LOC102214342 LOC102214342 rfc3 rfc3 RCBTB1 RCBTB1 rnf111 rnf111 gtf2h3 gtf2h3 nfrkb nfrkb ENSPNYP00000018622 ENSPNYP00000018622 rpa2 rpa2 xab2 xab2 ZNF830 ZNF830
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSPNYP00000019396Rad60-SLD domain-containing protein. (72 aa)
pias1Protein inhibitor of activated STAT, 1b. (654 aa)
polr2jPolymerase (RNA) II (DNA directed) polypeptide J. (117 aa)
ddb2Damage-specific DNA binding protein 2. (490 aa)
ube2v2Ubiquitin-conjugating enzyme E2 variant 2. (158 aa)
rad23aRAD23 homolog A, nucleotide excision repair protein a. (396 aa)
LOC102214201Transcription elongation factor A (SII), 2. (290 aa)
TCEANCTranscription elongation factor A N-terminal and central domain containing. (334 aa)
LOC102203776Small ubiquitin-related modifier. (94 aa)
LOC102201896Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1. (531 aa)
usp40Ubiquitin specific peptidase 40; Belongs to the peptidase C19 family. (1290 aa)
LOC102212432Small ubiquitin-related modifier. (96 aa)
gtf2h1General transcription factor IIH, polypeptide 1. (513 aa)
polr2gPolymerase (RNA) II (DNA directed) polypeptide G-like. (172 aa)
pold3Polymerase (DNA-directed), delta 3, accessory subunit. (443 aa)
LOC102215177Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (602 aa)
tcea1Transcription elongation factor A (SII), 1. (311 aa)
uba52Ubiquitin-like domain-containing protein. (128 aa)
cops8COP9 signalosome subunit 8. (191 aa)
aqrAquarius intron-binding spliceosomal factor. (1472 aa)
poleDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2015 aa)
pole2DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (509 aa)
ube2iUbiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
LOC106456278Ubiquitin-like domain-containing protein. (122 aa)
ino80cINO80 complex subunit C. (203 aa)
LOC102212740UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
pold2Polymerase (DNA directed), delta 2, regulatory subunit. (471 aa)
actbUncharacterized protein. (377 aa)
usp7Ubiquitin specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family. (1112 aa)
bivmBasic, immunoglobulin-like variable motif containing. (496 aa)
cdk7Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (343 aa)
ENSPNYP00000025590WD repeat-containing protein 76; Specifically binds 5-hydroxymethylcytosine (5hmC), suggesting that it acts as a specific reader of 5hmC. Belongs to the WD repeat DDB2/WDR76 family. (305 aa)
phf3PHD finger protein 3. (1733 aa)
ENSPNYP00000025918Polymerase (DNA directed) kappa. (409 aa)
ercc1Excision repair cross-complementation group 1. (352 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
POLR2ERNA polymerase II subunit E. (198 aa)
LOC102204724General transcription factor IIH subunit. (392 aa)
ENSPNYP00000026333Uncharacterized protein. (224 aa)
LOC106456478Actin, beta 1. (375 aa)
LOC102191989Uncharacterized protein. (375 aa)
rps27aRibosomal protein S27a. (188 aa)
mcrs1Microspherule protein 1. (466 aa)
ccnhCyclin H; Belongs to the cyclin family. (343 aa)
cops4COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis). (406 aa)
ENSPNYP00000006869Transcription elongation factor A (SII), 3. (170 aa)
ruvbl1RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (456 aa)
cops3COP9 signalosome subunit 3. (358 aa)
parp3Poly [ADP-ribose] polymerase. (532 aa)
ppiePeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (299 aa)
tceanc2Uncharacterized protein. (207 aa)
LOC102202864Actin, cytoplasmic-like. (253 aa)
polr2lPolymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
pold4Si:dkey-28b4.7. (107 aa)
COPS6COP9 signalosome subunit 6. (316 aa)
cetn3Centrin 3. (167 aa)
LOC102208280Damage-specific DNA binding protein 1. (562 aa)
gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (461 aa)
ercc6Excision repair cross-complementation group 6. (1408 aa)
cul4bCullin 4B; Belongs to the cullin family. (865 aa)
rcbtb2Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2. (527 aa)
parp1Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (999 aa)
actr8Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. (614 aa)
LOC102213521UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (153 aa)
ercc8Excision repair cross-complementation group 8. (409 aa)
wbp1Uncharacterized protein. (465 aa)
ino80dINO80 complex subunit Da. (959 aa)
pcnaProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
LOC102193700Von Willebrand factor A domain containing 5B2. (1035 aa)
cops2COP9 signalosome subunit 2. (443 aa)
pold1DNA polymerase. (1105 aa)
ENSPNYP00000011207Ubiquitin-like domain-containing protein. (128 aa)
rfc5Replication factor C (activator 1) 5. (342 aa)
LOC102200240Protein inhibitor of activated STAT 1. (586 aa)
tfptTCF3 (E2A) fusion partner. (199 aa)
kxd1KxDL motif containing 1. (184 aa)
lig1DNA ligase. (1012 aa)
LOC102213342Centrin 4. (185 aa)
YY1YY1 transcription factor b. (365 aa)
LOC102207357Small ubiquitin-related modifier. (94 aa)
xpaXeroderma pigmentosum, complementation group A. (271 aa)
ercc3Excision repair cross-complementation group 3. (783 aa)
prpf19Pre-mRNA processing factor 19. (505 aa)
LOC102212161Si:ch73-1a9.3. (84 aa)
ENSPNYP00000000447Uncharacterized protein. (64 aa)
hmgn5High mobility group nucleosome binding domain 6. (87 aa)
polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1182 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
meiobMethionine sulfoxide reductase B1b. (456 aa)
sumo1Small ubiquitin-related modifier. (101 aa)
ino80bINO80 complex subunit B. (336 aa)
LOC102213241YY1 transcription factor. (350 aa)
pole4Polymerase (DNA-directed), epsilon 4, accessory subunit. (129 aa)
ENSPNYP00000028993SCY domain-containing protein. (124 aa)
ercc2Excision repair cross-complementation group 2. (760 aa)
mnat1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (311 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1966 aa)
ino80eINO80 complex subunit E. (201 aa)
cops7aCOP9 constitutive photomorphogenic homolog subunit 7A. (268 aa)
LOC102208173Si:dkey-117m1.4. (834 aa)
nrde2NRDE-2, necessary for RNA interference, domain containing. (1152 aa)
rfc1Replication factor C subunit 1. (1153 aa)
polr2dRPOL4c domain-containing protein. (112 aa)
LOC102213167E1A binding protein p300 b. (2553 aa)
rbx1Ring-box 1, E3 ubiquitin protein ligase. (107 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (640 aa)
LOC102203234Damage-specific DNA binding protein 1. (573 aa)
rfc2Replication factor C (activator 1) 2. (356 aa)
LOC102203518Si:ch73-290k24.6. (856 aa)
LOC102215821Uncharacterized protein. (380 aa)
usp45Ubiquitin carboxyl-terminal hydrolase. (847 aa)
LOC102210571E1A binding protein p300 a. (2779 aa)
ENSPNYP00000005212Ubiquitin-like domain-containing protein. (114 aa)
polr2cPolymerase (RNA) II (DNA directed) polypeptide C. (275 aa)
LOC102196725Uncharacterized protein. (471 aa)
ENSPNYP00000004582XPGN domain-containing protein. (222 aa)
parp2Poly [ADP-ribose] polymerase. (641 aa)
ENSPNYP00000004552Excision repair cross-complementation group 5. (853 aa)
ino80INO80 complex ATPase subunit. (1454 aa)
gps1G protein pathway suppressor 1. (487 aa)
pole3Polymerase (DNA directed), epsilon 3 (p17 subunit). (150 aa)
ercc4Excision repair cross-complementation group 4. (886 aa)
ppp1r42Protein phosphatase 1, regulatory subunit 42. (282 aa)
cops5COP9 signalosome subunit 5. (334 aa)
cul4aCullin 4A; Belongs to the cullin family. (692 aa)
atad5AAA domain-containing protein. (746 aa)
xpcXeroderma pigmentosum, complementation group C. (892 aa)
rpa3Replication protein A3. (122 aa)
actr5Actin related protein 5; Belongs to the actin family. (603 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
rpap3RNA polymerase II associated protein 3. (652 aa)
rfc4Replication factor C (activator 1) 4. (357 aa)
gtf2h5General transcription factor IIH, polypeptide 5. (71 aa)
polr2kPolymerase (RNA) II (DNA directed) polypeptide K. (58 aa)
lig3DNA ligase. (1012 aa)
uvssaUV-stimulated scaffold protein A. (774 aa)
ENSPNYP00000016413Rad60-SLD domain-containing protein. (104 aa)
xrcc1X-ray repair complementing defective repair in Chinese hamster cells 1. (627 aa)
ENSPNYP00000006853TFIIS N-terminal domain-containing protein. (108 aa)
chd1lChromodomain helicase DNA binding protein 1-like. (894 aa)
LOC102214342Ubiquitin-conjugating enzyme E2Nb; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)
rfc3Replication factor C (activator 1) 3. (356 aa)
RCBTB1RCC1 and BTB domain containing protein 1. (531 aa)
rnf111Ring finger protein 111. (1007 aa)
gtf2h3General transcription factor IIH, polypeptide 3. (294 aa)
nfrkbNuclear factor related to kappaB binding protein. (1274 aa)
ENSPNYP00000018622Uncharacterized protein. (967 aa)
rpa2Replication protein A2. (293 aa)
xab2XPA binding protein 2. (849 aa)
ZNF830Zinc finger protein 830. (345 aa)
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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