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gtf2h3 gtf2h3 LOC102203234 LOC102203234 rbx1 rbx1 LOC102213167 LOC102213167 polr2d polr2d nrde2 nrde2 cops7a cops7a polr2a polr2a mnat1 mnat1 ercc2 ercc2 polr2h polr2h ccnh ccnh rps27a rps27a LOC102204724 LOC102204724 POLR2E POLR2E polr2f polr2f cdk7 cdk7 usp7 usp7 LOC106456278 LOC106456278 aqr aqr cops8 cops8 uba52 uba52 tcea1 tcea1 polr2g polr2g gtf2h1 gtf2h1 TCEANC TCEANC LOC102214201 LOC102214201 polr2j polr2j ZNF830 ZNF830 xab2 xab2 uvssa uvssa polr2k polr2k gtf2h5 gtf2h5 polr2i polr2i LOC102208280 LOC102208280 gtf2h4 gtf2h4 ercc6 ercc6 cul4b cul4b ercc8 ercc8 cops2 cops2 COPS6 COPS6 polr2l polr2l tceanc2 tceanc2 ppie ppie cops3 cops3 ENSPNYP00000006869 ENSPNYP00000006869 cops4 cops4 ENSPNYP00000006853 ENSPNYP00000006853 LOC102210571 LOC102210571 ENSPNYP00000005212 ENSPNYP00000005212 polr2c polr2c gps1 gps1 ppp1r42 ppp1r42 cops5 cops5 cul4a cul4a kxd1 kxd1 xpa xpa ercc3 ercc3 prpf19 prpf19 LOC102212161 LOC102212161 hmgn5 hmgn5 polr2b polr2b
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gtf2h3General transcription factor IIH, polypeptide 3. (294 aa)
LOC102203234Damage-specific DNA binding protein 1. (573 aa)
rbx1Ring-box 1, E3 ubiquitin protein ligase. (107 aa)
LOC102213167E1A binding protein p300 b. (2553 aa)
polr2dRPOL4c domain-containing protein. (112 aa)
nrde2NRDE-2, necessary for RNA interference, domain containing. (1152 aa)
cops7aCOP9 constitutive photomorphogenic homolog subunit 7A. (268 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1966 aa)
mnat1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (311 aa)
ercc2Excision repair cross-complementation group 2. (760 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
ccnhCyclin H; Belongs to the cyclin family. (343 aa)
rps27aRibosomal protein S27a. (188 aa)
LOC102204724General transcription factor IIH subunit. (392 aa)
POLR2ERNA polymerase II subunit E. (198 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
cdk7Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (343 aa)
usp7Ubiquitin specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family. (1112 aa)
LOC106456278Ubiquitin-like domain-containing protein. (122 aa)
aqrAquarius intron-binding spliceosomal factor. (1472 aa)
cops8COP9 signalosome subunit 8. (191 aa)
uba52Ubiquitin-like domain-containing protein. (128 aa)
tcea1Transcription elongation factor A (SII), 1. (311 aa)
polr2gPolymerase (RNA) II (DNA directed) polypeptide G-like. (172 aa)
gtf2h1General transcription factor IIH, polypeptide 1. (513 aa)
TCEANCTranscription elongation factor A N-terminal and central domain containing. (334 aa)
LOC102214201Transcription elongation factor A (SII), 2. (290 aa)
polr2jPolymerase (RNA) II (DNA directed) polypeptide J. (117 aa)
ZNF830Zinc finger protein 830. (345 aa)
xab2XPA binding protein 2. (849 aa)
uvssaUV-stimulated scaffold protein A. (774 aa)
polr2kPolymerase (RNA) II (DNA directed) polypeptide K. (58 aa)
gtf2h5General transcription factor IIH, polypeptide 5. (71 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
LOC102208280Damage-specific DNA binding protein 1. (562 aa)
gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (461 aa)
ercc6Excision repair cross-complementation group 6. (1408 aa)
cul4bCullin 4B; Belongs to the cullin family. (865 aa)
ercc8Excision repair cross-complementation group 8. (409 aa)
cops2COP9 signalosome subunit 2. (443 aa)
COPS6COP9 signalosome subunit 6. (316 aa)
polr2lPolymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
tceanc2Uncharacterized protein. (207 aa)
ppiePeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (299 aa)
cops3COP9 signalosome subunit 3. (358 aa)
ENSPNYP00000006869Transcription elongation factor A (SII), 3. (170 aa)
cops4COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis). (406 aa)
ENSPNYP00000006853TFIIS N-terminal domain-containing protein. (108 aa)
LOC102210571E1A binding protein p300 a. (2779 aa)
ENSPNYP00000005212Ubiquitin-like domain-containing protein. (114 aa)
polr2cPolymerase (RNA) II (DNA directed) polypeptide C. (275 aa)
gps1G protein pathway suppressor 1. (487 aa)
ppp1r42Protein phosphatase 1, regulatory subunit 42. (282 aa)
cops5COP9 signalosome subunit 5. (334 aa)
cul4aCullin 4A; Belongs to the cullin family. (692 aa)
kxd1KxDL motif containing 1. (184 aa)
xpaXeroderma pigmentosum, complementation group A. (271 aa)
ercc3Excision repair cross-complementation group 3. (783 aa)
prpf19Pre-mRNA processing factor 19. (505 aa)
LOC102212161Si:ch73-1a9.3. (84 aa)
hmgn5High mobility group nucleosome binding domain 6. (87 aa)
polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1182 aa)
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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