60 items (Pundamilia nyererei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rnf144a	RBR-type E3 ubiquitin transferase. (271 aa)
	LOC102192146	Ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
	rnf152	Ring finger protein 152. (165 aa)
	rnf20	E3 ubiquitin protein ligase. (1010 aa)
	LOC102203116	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (206 aa)
	LOC102203678	Ubiquitin-conjugating enzyme E2E 1; Belongs to the ubiquitin-conjugating enzyme family. (250 aa)
	ENSPNYP00000002037	WW domain-containing protein. (159 aa)
	kxd1	KxDL motif containing 1. (184 aa)
	UBE2D1	Ubiquitin-conjugating enzyme E2D 1a; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
	rnf181	RING-type domain-containing protein. (172 aa)
	yipf4	Protein YIPF. (237 aa)
	selenos	Selenoprotein S. (189 aa)
	ENSPNYP00000005212	Ubiquitin-like domain-containing protein. (114 aa)
	LOC102214393	Histone H2B; Belongs to the histone H2B family. (124 aa)
	ENSPNYP00000006710	Histone H2B; Belongs to the histone H2B family. (116 aa)
	tmem129	Transmembrane protein 129, E3 ubiquitin protein ligase. (367 aa)
	pex5l	Peroxisomal biogenesis factor 5-like a. (507 aa)
	slc39a13	Solute carrier family 39 member 13. (382 aa)
	ube2l3	Ubiquitin-conjugating enzyme E2L 3b; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)
	pex13	Peroxisomal biogenesis factor 13. (431 aa)
	rad18	RAD18 E3 ubiquitin protein ligase. (493 aa)
	hltf	Helicase-like transcription factor. (968 aa)
	pex14	Peroxisomal biogenesis factor 14. (388 aa)
	wac	WW domain containing adaptor with coiled-coil a. (544 aa)
	shprh	SNF2 histone linker PHD RING helicase. (1572 aa)
	LOC102211564	Ubiquitin-conjugating enzyme E2D 1b; Belongs to the ubiquitin-conjugating enzyme family. (140 aa)
	wdr61	WD repeat domain 61. (305 aa)
	pcna	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
	ctr9	CTR9 homolog, Paf1/RNA polymerase II complex component. (1148 aa)
	ube2d3	Ubiquitin-conjugating enzyme E2D 3; Belongs to the ubiquitin-conjugating enzyme family. (148 aa)
	LOC102213521	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (153 aa)
	ube2a	Ubiquitin-conjugating enzyme E2A (RAD6 homolog); Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
	leo1	LEO1 homolog, Paf1/RNA polymerase II complex component. (633 aa)
	ENSPNYP00000015944	Peroxisomal biogenesis factor 5-like b. (336 aa)
	LOC102210455	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (194 aa)
	ube2b	Ubiquitin-conjugating enzyme E2B (RAD6 homolog); Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
	LOC102210761	Ubiquitin-conjugating enzyme E2E 2; Belongs to the ubiquitin-conjugating enzyme family. (201 aa)
	LOC102214342	Ubiquitin-conjugating enzyme E2Nb; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)
	yipf5	Protein YIPF. (257 aa)
	ube2v2	Ubiquitin-conjugating enzyme E2 variant 2. (158 aa)
	LOC102199873	Histone H2B; Belongs to the histone H2B family. (114 aa)
	LOC102197970	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (148 aa)
	paf1	PAF1 homolog, Paf1/RNA polymerase II complex component. (533 aa)
	pex12	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family. (350 aa)
	LOC102212046	Ubiquitin-conjugating enzyme E2D 4 (putative); Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
	uba52	Ubiquitin-like domain-containing protein. (128 aa)
	LOC106456278	Ubiquitin-like domain-containing protein. (122 aa)
	rnf40	E3 ubiquitin protein ligase. (967 aa)
	ENSPNYP00000024424	BCL10 immune signaling adaptor. (248 aa)
	prkdc	Protein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family. (3978 aa)
	LOC102193714	Ubiquitin conjugating enzyme E2 A, like; Belongs to the ubiquitin-conjugating enzyme family. (163 aa)
	rps27a	Ribosomal protein S27a. (188 aa)
	cinp	Cyclin-dependent kinase 2 interacting protein. (210 aa)
	cdc73	Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). (530 aa)
	pex10	Peroxisomal biogenesis factor 10. (322 aa)
	LOC102198163	Ras-related GTP binding A. (315 aa)
	rtf1	RTF1 homolog, Paf1/RNA polymerase II complex component. (658 aa)
	pex2	Peroxisomal biogenesis factor 2. (330 aa)
	ENSPNYP00000029649	Histone H2B; Belongs to the histone H2B family. (282 aa)
	pex5	Peroxisomal biogenesis factor 5. (642 aa)

Your Current Organism:

Pundamilia nyererei

NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPNYP00000002037	ENSPNYP00000005212	ENSPNYP00000002037	ENSPNYP00000005212	WW domain-containing protein.	Ubiquitin-like domain-containing protein.	0.578
ENSPNYP00000002037	ENSPNYP00000006710	ENSPNYP00000002037	ENSPNYP00000006710	WW domain-containing protein.	Histone H2B; Belongs to the histone H2B family.	0.609
ENSPNYP00000002037	ENSPNYP00000029649	ENSPNYP00000002037	ENSPNYP00000029649	WW domain-containing protein.	Histone H2B; Belongs to the histone H2B family.	0.609
ENSPNYP00000002037	LOC102193714	ENSPNYP00000002037	ENSPNYP00000026109	WW domain-containing protein.	Ubiquitin conjugating enzyme E2 A, like; Belongs to the ubiquitin-conjugating enzyme family.	0.656
ENSPNYP00000002037	LOC102199873	ENSPNYP00000002037	ENSPNYP00000020505	WW domain-containing protein.	Histone H2B; Belongs to the histone H2B family.	0.609
ENSPNYP00000002037	LOC102214393	ENSPNYP00000002037	ENSPNYP00000006524	WW domain-containing protein.	Histone H2B; Belongs to the histone H2B family.	0.609
ENSPNYP00000002037	LOC106456278	ENSPNYP00000002037	ENSPNYP00000023328	WW domain-containing protein.	Ubiquitin-like domain-containing protein.	0.578
ENSPNYP00000002037	cdc73	ENSPNYP00000002037	ENSPNYP00000026692	WW domain-containing protein.	Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).	0.663
ENSPNYP00000002037	cinp	ENSPNYP00000002037	ENSPNYP00000026658	WW domain-containing protein.	Cyclin-dependent kinase 2 interacting protein.	0.691
ENSPNYP00000002037	ctr9	ENSPNYP00000002037	ENSPNYP00000011925	WW domain-containing protein.	CTR9 homolog, Paf1/RNA polymerase II complex component.	0.697
ENSPNYP00000002037	leo1	ENSPNYP00000002037	ENSPNYP00000015044	WW domain-containing protein.	LEO1 homolog, Paf1/RNA polymerase II complex component.	0.985
ENSPNYP00000002037	paf1	ENSPNYP00000002037	ENSPNYP00000021244	WW domain-containing protein.	PAF1 homolog, Paf1/RNA polymerase II complex component.	0.685
ENSPNYP00000002037	rnf20	ENSPNYP00000002037	ENSPNYP00000001001	WW domain-containing protein.	E3 ubiquitin protein ligase.	0.874
ENSPNYP00000002037	rnf40	ENSPNYP00000002037	ENSPNYP00000023379	WW domain-containing protein.	E3 ubiquitin protein ligase.	0.874
ENSPNYP00000002037	rps27a	ENSPNYP00000002037	ENSPNYP00000026531	WW domain-containing protein.	Ribosomal protein S27a.	0.686
ENSPNYP00000002037	uba52	ENSPNYP00000002037	ENSPNYP00000021999	WW domain-containing protein.	Ubiquitin-like domain-containing protein.	0.578
ENSPNYP00000002037	ube2a	ENSPNYP00000002037	ENSPNYP00000012757	WW domain-containing protein.	Ubiquitin-conjugating enzyme E2A (RAD6 homolog); Belongs to the ubiquitin-conjugating enzyme family.	0.656
ENSPNYP00000002037	ube2b	ENSPNYP00000002037	ENSPNYP00000016557	WW domain-containing protein.	Ubiquitin-conjugating enzyme E2B (RAD6 homolog); Belongs to the ubiquitin-conjugating enzyme family.	0.656
ENSPNYP00000005212	ENSPNYP00000002037	ENSPNYP00000005212	ENSPNYP00000002037	Ubiquitin-like domain-containing protein.	WW domain-containing protein.	0.578
ENSPNYP00000005212	ENSPNYP00000006710	ENSPNYP00000005212	ENSPNYP00000006710	Ubiquitin-like domain-containing protein.	Histone H2B; Belongs to the histone H2B family.	0.821