16 items (Pundamilia nyererei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	sqstm1	Sequestosome 1. (428 aa)
	nbr1	NBR1 autophagy cargo receptor a. (1070 aa)
	kxd1	KxDL motif containing 1. (184 aa)
	LOC102215228	NBR1 autophagy cargo receptor b. (693 aa)
	ENSPNYP00000005212	Ubiquitin-like domain-containing protein. (114 aa)
	LOC102193458	Inflammation and lipid regulator with UBA-like and NBR1-like domains. (280 aa)
	pex5l	Peroxisomal biogenesis factor 5-like a. (507 aa)
	ENSPNYP00000011331	GSAP-16 domain-containing protein. (178 aa)
	atm	Non-specific serine/threonine protein kinase. (3051 aa)
	ENSPNYP00000015944	Peroxisomal biogenesis factor 5-like b. (336 aa)
	usp30	Ubiquitin carboxyl-terminal hydrolase. (503 aa)
	uba52	Ubiquitin-like domain-containing protein. (128 aa)
	LOC106456278	Ubiquitin-like domain-containing protein. (122 aa)
	ILRUN	Inflammation and lipid regulator with UBA-like and NBR1-like domains. (288 aa)
	rps27a	Ribosomal protein S27a. (188 aa)
	pex5	Peroxisomal biogenesis factor 5. (642 aa)

Your Current Organism:

Pundamilia nyererei

NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPNYP00000005212	ENSPNYP00000011331	ENSPNYP00000005212	ENSPNYP00000011331	Ubiquitin-like domain-containing protein.	GSAP-16 domain-containing protein.	0.792
ENSPNYP00000005212	ENSPNYP00000015944	ENSPNYP00000005212	ENSPNYP00000015944	Ubiquitin-like domain-containing protein.	Peroxisomal biogenesis factor 5-like b.	0.600
ENSPNYP00000005212	ILRUN	ENSPNYP00000005212	ENSPNYP00000024334	Ubiquitin-like domain-containing protein.	Inflammation and lipid regulator with UBA-like and NBR1-like domains.	0.568
ENSPNYP00000005212	LOC102193458	ENSPNYP00000005212	ENSPNYP00000006403	Ubiquitin-like domain-containing protein.	Inflammation and lipid regulator with UBA-like and NBR1-like domains.	0.568
ENSPNYP00000005212	LOC102215228	ENSPNYP00000005212	ENSPNYP00000003205	Ubiquitin-like domain-containing protein.	NBR1 autophagy cargo receptor b.	0.967
ENSPNYP00000005212	nbr1	ENSPNYP00000005212	ENSPNYP00000002027	Ubiquitin-like domain-containing protein.	NBR1 autophagy cargo receptor a.	0.967
ENSPNYP00000005212	pex5	ENSPNYP00000005212	ENSPNYP00000030386	Ubiquitin-like domain-containing protein.	Peroxisomal biogenesis factor 5.	0.600
ENSPNYP00000005212	pex5l	ENSPNYP00000005212	ENSPNYP00000007388	Ubiquitin-like domain-containing protein.	Peroxisomal biogenesis factor 5-like a.	0.600
ENSPNYP00000005212	rps27a	ENSPNYP00000005212	ENSPNYP00000026531	Ubiquitin-like domain-containing protein.	Ribosomal protein S27a.	0.996
ENSPNYP00000005212	sqstm1	ENSPNYP00000005212	ENSPNYP00000000010	Ubiquitin-like domain-containing protein.	Sequestosome 1.	0.792
ENSPNYP00000005212	usp30	ENSPNYP00000005212	ENSPNYP00000021088	Ubiquitin-like domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.943
ENSPNYP00000011331	ENSPNYP00000005212	ENSPNYP00000011331	ENSPNYP00000005212	GSAP-16 domain-containing protein.	Ubiquitin-like domain-containing protein.	0.792
ENSPNYP00000011331	ENSPNYP00000015944	ENSPNYP00000011331	ENSPNYP00000015944	GSAP-16 domain-containing protein.	Peroxisomal biogenesis factor 5-like b.	0.720
ENSPNYP00000011331	ILRUN	ENSPNYP00000011331	ENSPNYP00000024334	GSAP-16 domain-containing protein.	Inflammation and lipid regulator with UBA-like and NBR1-like domains.	0.711
ENSPNYP00000011331	LOC102193458	ENSPNYP00000011331	ENSPNYP00000006403	GSAP-16 domain-containing protein.	Inflammation and lipid regulator with UBA-like and NBR1-like domains.	0.711
ENSPNYP00000011331	LOC102215228	ENSPNYP00000011331	ENSPNYP00000003205	GSAP-16 domain-containing protein.	NBR1 autophagy cargo receptor b.	0.943
ENSPNYP00000011331	LOC106456278	ENSPNYP00000011331	ENSPNYP00000023328	GSAP-16 domain-containing protein.	Ubiquitin-like domain-containing protein.	0.792
ENSPNYP00000011331	atm	ENSPNYP00000011331	ENSPNYP00000014790	GSAP-16 domain-containing protein.	Non-specific serine/threonine protein kinase.	0.824
ENSPNYP00000011331	nbr1	ENSPNYP00000011331	ENSPNYP00000002027	GSAP-16 domain-containing protein.	NBR1 autophagy cargo receptor a.	0.943
ENSPNYP00000011331	pex5	ENSPNYP00000011331	ENSPNYP00000030386	GSAP-16 domain-containing protein.	Peroxisomal biogenesis factor 5.	0.720