4 items (Pundamilia nyererei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	nbr1	NBR1 autophagy cargo receptor a. (1070 aa)
	ILRUN	Inflammation and lipid regulator with UBA-like and NBR1-like domains. (288 aa)
	LOC102193458	Inflammation and lipid regulator with UBA-like and NBR1-like domains. (280 aa)
	LOC102215228	NBR1 autophagy cargo receptor b. (693 aa)

Your Current Organism:

Pundamilia nyererei

NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ILRUN	LOC102215228	ENSPNYP00000024334	ENSPNYP00000003205	Inflammation and lipid regulator with UBA-like and NBR1-like domains.	NBR1 autophagy cargo receptor b.	0.711
ILRUN	nbr1	ENSPNYP00000024334	ENSPNYP00000002027	Inflammation and lipid regulator with UBA-like and NBR1-like domains.	NBR1 autophagy cargo receptor a.	0.711
LOC102193458	LOC102215228	ENSPNYP00000006403	ENSPNYP00000003205	Inflammation and lipid regulator with UBA-like and NBR1-like domains.	NBR1 autophagy cargo receptor b.	0.711
LOC102193458	nbr1	ENSPNYP00000006403	ENSPNYP00000002027	Inflammation and lipid regulator with UBA-like and NBR1-like domains.	NBR1 autophagy cargo receptor a.	0.711
LOC102215228	ILRUN	ENSPNYP00000003205	ENSPNYP00000024334	NBR1 autophagy cargo receptor b.	Inflammation and lipid regulator with UBA-like and NBR1-like domains.	0.711
LOC102215228	LOC102193458	ENSPNYP00000003205	ENSPNYP00000006403	NBR1 autophagy cargo receptor b.	Inflammation and lipid regulator with UBA-like and NBR1-like domains.	0.711
LOC102215228	nbr1	ENSPNYP00000003205	ENSPNYP00000002027	NBR1 autophagy cargo receptor b.	NBR1 autophagy cargo receptor a.	0.998
nbr1	ILRUN	ENSPNYP00000002027	ENSPNYP00000024334	NBR1 autophagy cargo receptor a.	Inflammation and lipid regulator with UBA-like and NBR1-like domains.	0.711
nbr1	LOC102193458	ENSPNYP00000002027	ENSPNYP00000006403	NBR1 autophagy cargo receptor a.	Inflammation and lipid regulator with UBA-like and NBR1-like domains.	0.711
nbr1	LOC102215228	ENSPNYP00000002027	ENSPNYP00000003205	NBR1 autophagy cargo receptor a.	NBR1 autophagy cargo receptor b.	0.998