31 items (Pundamilia nyererei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	sec61a1	Plug_translocon domain-containing protein. (476 aa)
	ENSPNYP00000028210	Uncharacterized protein. (52 aa)
	itfg2	Integrin alpha FG-GAP repeat containing 2. (433 aa)
	sec61g	SEC61 translocon gamma subunit. (68 aa)
	LOC102193117	Cytochrome c oxidase assembly factor COX18. (338 aa)
	srp14	Signal recognition particle 14. (110 aa)
	spcs3	Signal peptidase complex subunit 3. (133 aa)
	srp72	Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family. (668 aa)
	ENSPNYP00000005359	Uncharacterized protein. (99 aa)
	spcs1	Signal peptidase complex subunit 1. (102 aa)
	LOC102202762	Yippee domain-containing protein. (171 aa)
	srprb	SRP receptor subunit beta. (276 aa)
	LOC102204132	Plug_translocon domain-containing protein. (476 aa)
	sec62	SEC62 homolog, preprotein translocation factor. (349 aa)
	ENSPNYP00000012236	Uncharacterized protein. (133 aa)
	srp54	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. (504 aa)
	spcs2	Signal peptidase complex subunit 2. (215 aa)
	srp9	Signal recognition particle 9 kDa protein; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP. The complex of SRP9 and SRP14 is required for SRP RNA binding. (86 aa)
	srpra	SRP receptor subunit alpha. (647 aa)
	LOC102202246	Protein yippee-like; Belongs to the yippee family. (119 aa)
	sec63	SEC63 homolog, protein translocation regulator. (710 aa)
	YPEL5	Protein yippee-like; Belongs to the yippee family. (121 aa)
	LOC102208956	Protein yippee-like; Belongs to the yippee family. (119 aa)
	TMEM19	Transmembrane protein 19. (335 aa)
	srp68	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family. (591 aa)
	sec61b	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. (97 aa)
	immp1l	Mitochondrial inner membrane protease subunit. (172 aa)
	sec11a	Signal peptidase complex catalytic subunit SEC11. (179 aa)
	immp2l	Mitochondrial inner membrane protease subunit. (176 aa)
	LOC102198886	Protein yippee-like; Belongs to the yippee family. (120 aa)
	hspa5	Heat shock protein 5; Belongs to the heat shock protein 70 family. (633 aa)

Your Current Organism:

Pundamilia nyererei

NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPNYP00000005359	LOC102204132	ENSPNYP00000005359	ENSPNYP00000008001	Uncharacterized protein.	Plug_translocon domain-containing protein.	0.698
ENSPNYP00000005359	sec61a1	ENSPNYP00000005359	ENSPNYP00000026797	Uncharacterized protein.	Plug_translocon domain-containing protein.	0.698
ENSPNYP00000005359	sec61b	ENSPNYP00000005359	ENSPNYP00000023701	Uncharacterized protein.	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	0.529
ENSPNYP00000005359	sec62	ENSPNYP00000005359	ENSPNYP00000011052	Uncharacterized protein.	SEC62 homolog, preprotein translocation factor.	0.494
ENSPNYP00000005359	sec63	ENSPNYP00000005359	ENSPNYP00000018039	Uncharacterized protein.	SEC63 homolog, protein translocation regulator.	0.947
ENSPNYP00000005359	spcs2	ENSPNYP00000005359	ENSPNYP00000013506	Uncharacterized protein.	Signal peptidase complex subunit 2.	0.761
ENSPNYP00000005359	srp54	ENSPNYP00000005359	ENSPNYP00000012917	Uncharacterized protein.	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	0.455
ENSPNYP00000012236	LOC102204132	ENSPNYP00000012236	ENSPNYP00000008001	Uncharacterized protein.	Plug_translocon domain-containing protein.	0.698
ENSPNYP00000012236	sec61a1	ENSPNYP00000012236	ENSPNYP00000026797	Uncharacterized protein.	Plug_translocon domain-containing protein.	0.698
ENSPNYP00000012236	sec61b	ENSPNYP00000012236	ENSPNYP00000023701	Uncharacterized protein.	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	0.529
ENSPNYP00000012236	sec62	ENSPNYP00000012236	ENSPNYP00000011052	Uncharacterized protein.	SEC62 homolog, preprotein translocation factor.	0.494
ENSPNYP00000012236	sec63	ENSPNYP00000012236	ENSPNYP00000018039	Uncharacterized protein.	SEC63 homolog, protein translocation regulator.	0.947
ENSPNYP00000012236	spcs2	ENSPNYP00000012236	ENSPNYP00000013506	Uncharacterized protein.	Signal peptidase complex subunit 2.	0.761
ENSPNYP00000012236	srp54	ENSPNYP00000012236	ENSPNYP00000012917	Uncharacterized protein.	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	0.455
ENSPNYP00000028210	LOC102204132	ENSPNYP00000028210	ENSPNYP00000008001	Uncharacterized protein.	Plug_translocon domain-containing protein.	0.980
ENSPNYP00000028210	sec61a1	ENSPNYP00000028210	ENSPNYP00000026797	Uncharacterized protein.	Plug_translocon domain-containing protein.	0.980
ENSPNYP00000028210	sec61b	ENSPNYP00000028210	ENSPNYP00000023701	Uncharacterized protein.	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	0.997
ENSPNYP00000028210	sec62	ENSPNYP00000028210	ENSPNYP00000011052	Uncharacterized protein.	SEC62 homolog, preprotein translocation factor.	0.954
ENSPNYP00000028210	sec63	ENSPNYP00000028210	ENSPNYP00000018039	Uncharacterized protein.	SEC63 homolog, protein translocation regulator.	0.970
ENSPNYP00000028210	spcs1	ENSPNYP00000028210	ENSPNYP00000006589	Uncharacterized protein.	Signal peptidase complex subunit 1.	0.690