STRINGSTRING
dntt dntt poll poll fen1 fen1 nhej1 nhej1 xrcc5 xrcc5 LOC102195724 LOC102195724 lrmda lrmda ENSPNYP00000014491 ENSPNYP00000014491 dclre1c dclre1c lig4 lig4 polm polm enkd1 enkd1 ENSPNYP00000006833 ENSPNYP00000006833 xrcc6 xrcc6 rad50 rad50 mre11 mre11 prkdc prkdc xrcc4 xrcc4 gtf3c3 gtf3c3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
dnttDNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family. (477 aa)
pollPolymerase (DNA directed), lambda; Belongs to the DNA polymerase type-X family. (597 aa)
fen1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (380 aa)
nhej1Nonhomologous end-joining factor 1. (325 aa)
xrcc5X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. (723 aa)
LOC102195724Zgc:110269. (323 aa)
lrmdaLeucine rich melanocyte differentiation associated. (195 aa)
ENSPNYP00000014491X-ray repair complementing defective repair in Chinese hamster cells 4. (286 aa)
dclre1cDNA cross-link repair 1C, PSO2 homolog (S. cerevisiae). (578 aa)
lig4DNA ligase. (910 aa)
polmDNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family. (530 aa)
enkd1Enkurin domain-containing protein. (306 aa)
ENSPNYP00000006833Uncharacterized protein. (255 aa)
xrcc6X-ray repair complementing defective repair in Chinese hamster cells 6. (645 aa)
rad50RAD50 homolog, double strand break repair protein. (1312 aa)
mre11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (689 aa)
prkdcProtein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family. (3978 aa)
xrcc4Uncharacterized protein. (297 aa)
gtf3c3General transcription factor IIIC, polypeptide 3. (934 aa)
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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