(6 nodes) Cdc73/Paf1 complex, and HULC complex network (Opisthocomus hoazin)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N306_00242	RNA polymerase-associated protein CTR9. (1152 aa)
	N306_10435	Ubiquitin-conjugating enzyme E2 B; Belongs to the ubiquitin-conjugating enzyme family. (146 aa)
	N306_01131	E3 ubiquitin protein ligase. (982 aa)
	N306_08069	RNA polymerase-associated protein RTF1. (622 aa)
	N306_01447	Parafibromin. (486 aa)
	N306_15293	RNA polymerase-associated protein LEO1. (637 aa)

Your Current Organism:

Opisthocomus hoazin

NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N306_00242	N306_01131	A0A091V5E4	A0A091VSW9	RNA polymerase-associated protein CTR9.	E3 ubiquitin protein ligase.	0.840
N306_00242	N306_01447	A0A091V5E4	A0A091WH85	RNA polymerase-associated protein CTR9.	Parafibromin.	0.999
N306_00242	N306_08069	A0A091V5E4	A0A091W1L8	RNA polymerase-associated protein CTR9.	RNA polymerase-associated protein RTF1.	0.997
N306_00242	N306_10435	A0A091V5E4	A0A091VGB9	RNA polymerase-associated protein CTR9.	Ubiquitin-conjugating enzyme E2 B; Belongs to the ubiquitin-conjugating enzyme family.	0.662
N306_00242	N306_15293	A0A091V5E4	A0A091WJ73	RNA polymerase-associated protein CTR9.	RNA polymerase-associated protein LEO1.	0.999
N306_01131	N306_00242	A0A091VSW9	A0A091V5E4	E3 ubiquitin protein ligase.	RNA polymerase-associated protein CTR9.	0.840
N306_01131	N306_01447	A0A091VSW9	A0A091WH85	E3 ubiquitin protein ligase.	Parafibromin.	0.898
N306_01131	N306_08069	A0A091VSW9	A0A091W1L8	E3 ubiquitin protein ligase.	RNA polymerase-associated protein RTF1.	0.706
N306_01131	N306_10435	A0A091VSW9	A0A091VGB9	E3 ubiquitin protein ligase.	Ubiquitin-conjugating enzyme E2 B; Belongs to the ubiquitin-conjugating enzyme family.	0.952
N306_01131	N306_15293	A0A091VSW9	A0A091WJ73	E3 ubiquitin protein ligase.	RNA polymerase-associated protein LEO1.	0.993
N306_01447	N306_00242	A0A091WH85	A0A091V5E4	Parafibromin.	RNA polymerase-associated protein CTR9.	0.999
N306_01447	N306_01131	A0A091WH85	A0A091VSW9	Parafibromin.	E3 ubiquitin protein ligase.	0.898
N306_01447	N306_08069	A0A091WH85	A0A091W1L8	Parafibromin.	RNA polymerase-associated protein RTF1.	0.997
N306_01447	N306_10435	A0A091WH85	A0A091VGB9	Parafibromin.	Ubiquitin-conjugating enzyme E2 B; Belongs to the ubiquitin-conjugating enzyme family.	0.690
N306_01447	N306_15293	A0A091WH85	A0A091WJ73	Parafibromin.	RNA polymerase-associated protein LEO1.	0.999
N306_08069	N306_00242	A0A091W1L8	A0A091V5E4	RNA polymerase-associated protein RTF1.	RNA polymerase-associated protein CTR9.	0.997
N306_08069	N306_01131	A0A091W1L8	A0A091VSW9	RNA polymerase-associated protein RTF1.	E3 ubiquitin protein ligase.	0.706
N306_08069	N306_01447	A0A091W1L8	A0A091WH85	RNA polymerase-associated protein RTF1.	Parafibromin.	0.997
N306_08069	N306_10435	A0A091W1L8	A0A091VGB9	RNA polymerase-associated protein RTF1.	Ubiquitin-conjugating enzyme E2 B; Belongs to the ubiquitin-conjugating enzyme family.	0.539
N306_08069	N306_15293	A0A091W1L8	A0A091WJ73	RNA polymerase-associated protein RTF1.	RNA polymerase-associated protein LEO1.	0.999