10 items (Opisthocomus hoazin) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N306_04499	DNA-directed RNA polymerase I subunit RPA43. (248 aa)
	N306_05834	DNA-directed RNA polymerases I, II, and III subunit RPABC3. (102 aa)
	N306_12859	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1019 aa)
	N306_05132	DNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
	N306_02358	Uncharacterized protein. (120 aa)
	N306_12042	DNA-directed RNA polymerases I and III subunit RPAC2. (96 aa)
	N306_05639	DNA-directed RNA polymerases I, II, and III subunit RPABC4. (55 aa)
	N306_03524	DNA-directed RNA polymerase I subunit RPA49. (381 aa)
	N306_07617	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1676 aa)
	N306_08911	DNA-directed RNA polymerases I and III subunit RPAC1. (264 aa)

Your Current Organism:

Opisthocomus hoazin

NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N306_03524	N306_04499	A0A091WB04	A0A091VU76	DNA-directed RNA polymerase I subunit RPA49.	DNA-directed RNA polymerase I subunit RPA43.	0.999
N306_03524	N306_05132	A0A091WB04	A0A091VT23	DNA-directed RNA polymerase I subunit RPA49.	DNA-directed RNA polymerases I, II, and III subunit RPABC5.	0.996
N306_03524	N306_05639	A0A091WB04	A0A091WD55	DNA-directed RNA polymerase I subunit RPA49.	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	0.996
N306_03524	N306_05834	A0A091WB04	A0A091WLA5	DNA-directed RNA polymerase I subunit RPA49.	DNA-directed RNA polymerases I, II, and III subunit RPABC3.	0.996
N306_03524	N306_07617	A0A091WB04	A0A091W6V7	DNA-directed RNA polymerase I subunit RPA49.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
N306_03524	N306_08911	A0A091WB04	A0A091W4I7	DNA-directed RNA polymerase I subunit RPA49.	DNA-directed RNA polymerases I and III subunit RPAC1.	0.999
N306_03524	N306_12042	A0A091WB04	A0A091WF37	DNA-directed RNA polymerase I subunit RPA49.	DNA-directed RNA polymerases I and III subunit RPAC2.	0.993
N306_03524	N306_12859	A0A091WB04	A0A091WH22	DNA-directed RNA polymerase I subunit RPA49.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
N306_04499	N306_03524	A0A091VU76	A0A091WB04	DNA-directed RNA polymerase I subunit RPA43.	DNA-directed RNA polymerase I subunit RPA49.	0.999
N306_04499	N306_05132	A0A091VU76	A0A091VT23	DNA-directed RNA polymerase I subunit RPA43.	DNA-directed RNA polymerases I, II, and III subunit RPABC5.	0.999
N306_04499	N306_05639	A0A091VU76	A0A091WD55	DNA-directed RNA polymerase I subunit RPA43.	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	0.999
N306_04499	N306_05834	A0A091VU76	A0A091WLA5	DNA-directed RNA polymerase I subunit RPA43.	DNA-directed RNA polymerases I, II, and III subunit RPABC3.	0.999
N306_04499	N306_07617	A0A091VU76	A0A091W6V7	DNA-directed RNA polymerase I subunit RPA43.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
N306_04499	N306_08911	A0A091VU76	A0A091W4I7	DNA-directed RNA polymerase I subunit RPA43.	DNA-directed RNA polymerases I and III subunit RPAC1.	0.999
N306_04499	N306_12042	A0A091VU76	A0A091WF37	DNA-directed RNA polymerase I subunit RPA43.	DNA-directed RNA polymerases I and III subunit RPAC2.	0.999
N306_04499	N306_12859	A0A091VU76	A0A091WH22	DNA-directed RNA polymerase I subunit RPA43.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
N306_05132	N306_03524	A0A091VT23	A0A091WB04	DNA-directed RNA polymerases I, II, and III subunit RPABC5.	DNA-directed RNA polymerase I subunit RPA49.	0.996
N306_05132	N306_04499	A0A091VT23	A0A091VU76	DNA-directed RNA polymerases I, II, and III subunit RPABC5.	DNA-directed RNA polymerase I subunit RPA43.	0.999
N306_05132	N306_05639	A0A091VT23	A0A091WD55	DNA-directed RNA polymerases I, II, and III subunit RPABC5.	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	0.999
N306_05132	N306_05834	A0A091VT23	A0A091WLA5	DNA-directed RNA polymerases I, II, and III subunit RPABC5.	DNA-directed RNA polymerases I, II, and III subunit RPABC3.	0.999