STRINGSTRING
N306_04314 N306_04314 N306_08636 N306_08636 N306_12563 N306_12563 N306_13873 N306_13873 N306_02421 N306_02421 N306_12099 N306_12099 N306_15293 N306_15293 N306_03294 N306_03294 N306_03377 N306_03377 N306_15095 N306_15095 N306_09603 N306_09603 N306_11639 N306_11639 N306_02422 N306_02422 N306_01131 N306_01131 N306_00681 N306_00681 N306_12344 N306_12344 N306_07299 N306_07299 N306_10435 N306_10435 N306_09318 N306_09318 N306_02898 N306_02898 N306_00242 N306_00242
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N306_04314E3 ubiquitin-protein ligase RNF8. (136 aa)
N306_08636Polycomb protein SUZ12. (653 aa)
N306_12563Polycomb complex protein BMI-1. (291 aa)
N306_13873Polycomb group RING finger protein 5. (241 aa)
N306_02421E3 ubiquitin-protein ligase RNF8. (136 aa)
N306_12099E3 ubiquitin-protein ligase TRIM37. (978 aa)
N306_15293RNA polymerase-associated protein LEO1. (637 aa)
N306_03294E3 ubiquitin-protein ligase RNF168. (570 aa)
N306_03377Polycomb group RING finger protein 6. (229 aa)
N306_15095Ubiquitin-conjugating enzyme E2 A; Belongs to the ubiquitin-conjugating enzyme family. (102 aa)
N306_09603V(D)J recombination-activating protein 1; Catalytic component of the RAG complex, a multiprotein complex that mediates the DNA cleavage phase during V(D)J recombination. V(D)J recombination assembles a diverse repertoire of immunoglobulin and T-cell receptor genes in developing B and T- lymphocytes through rearrangement of different V (variable), in some cases D (diversity), and J (joining) gene segments. In the RAG complex, RAG1 mediates the DNA-binding to the conserved recombination signal sequences (RSS) and catalyzes the DNA cleavage activities by introducing a double-strand break [...] (1036 aa)
N306_11639E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (1725 aa)
N306_02422E3 ubiquitin-protein ligase RNF8. (225 aa)
N306_01131E3 ubiquitin protein ligase. (982 aa)
N306_00681WW domain-containing adapter protein with coiled-coil. (604 aa)
N306_12344Polycomb group RING finger protein 3. (245 aa)
N306_07299BCL-6 corepressor. (1072 aa)
N306_10435Ubiquitin-conjugating enzyme E2 B; Belongs to the ubiquitin-conjugating enzyme family. (146 aa)
N306_09318E3 ubiquitin-protein ligase DTX3L. (609 aa)
N306_02898E3 ubiquitin-protein ligase RING2. (336 aa)
N306_00242RNA polymerase-associated protein CTR9. (1152 aa)
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.