STRINGSTRING
N306_03632 N306_03632 N306_11972 N306_11972 N306_09708 N306_09708 N306_04813 N306_04813 N306_05702 N306_05702 N306_15121 N306_15121 N306_06501 N306_06501 N306_00128 N306_00128 N306_11775 N306_11775 N306_10679 N306_10679 N306_04280 N306_04280 N306_08695 N306_08695 N306_09026 N306_09026 N306_13577 N306_13577
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N306_03632Pre-mRNA-processing factor 39. (626 aa)
N306_11972Pre-mRNA-splicing factor RBM22. (402 aa)
N306_09708Lens epithelium-derived growth factor. (537 aa)
N306_04813Splicing factor 45. (401 aa)
N306_05702Splicing factor 3A subunit 1. (779 aa)
N306_15121Serine/threonine-protein kinase PRP4. (992 aa)
N306_06501Splicing factor, suppressor of white-apricot. (926 aa)
N306_00128Spliceosome-associated protein CWC15. (223 aa)
N306_11775DnaJ subfamily C member 8. (228 aa)
N306_10679U1 small nuclear ribonucleoprotein C. (142 aa)
N306_04280WW domain-binding protein 11. (650 aa)
N306_08695Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (108 aa)
N306_09026M7GpppX diphosphatase. (227 aa)
N306_13577Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (57 aa)
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
Server load: low (28%) [HD]