58 items (Opisthocomus hoazin) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N306_02833	RE1-silencing transcription factor. (862 aa)
	N306_11707	Uncharacterized protein. (125 aa)
	N306_08621	Putative ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family. (600 aa)
	N306_11283	KH domain-containing, RNA-binding, signal transduction-associated protein 3. (316 aa)
	N306_03411	RNA-binding protein 20. (151 aa)
	N306_08373	Polypyrimidine tract-binding protein 1. (494 aa)
	N306_05040	Fragile X mental retardation syndrome-related protein 1. (644 aa)
	N306_03442	RNA-binding protein 6. (1096 aa)
	N306_06453	RNA binding protein fox-1 2. (301 aa)
	N306_13614	CUGBP Elav-like family member 5. (400 aa)
	N306_08674	Muscleblind-like 3. (371 aa)
	N306_10241	Muscleblind-like 1. (368 aa)
	N306_09928	La-related protein 7. (571 aa)
	N306_08771	KH domain-containing, RNA-binding, signal transduction-associated protein 2. (196 aa)
	N306_02681	Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6. (338 aa)
	N306_09126	Histone deacetylase complex subunit SAP18. (105 aa)
	N306_13746	Poly(U)-binding-splicing factor PUF60. (286 aa)
	N306_08019	CUGBP Elav-like family member 1. (515 aa)
	N306_03766	CUGBP Elav-like family member 4. (302 aa)
	N306_07339	DAZ-associated protein 1. (398 aa)
	N306_03438	Putative RNA-binding protein 15B. (557 aa)
	N306_14506	Pre-mRNA-splicing regulator WTAP. (371 aa)
	N306_03309	Transformer-2 protein beta. (230 aa)
	N306_11153	Polypyrimidine tract-binding protein 3. (507 aa)
	N306_01001	Nuclear pore complex protein Nup98-Nup96. (1703 aa)
	N306_11553	CUGBP Elav-like family member 2. (499 aa)
	N306_12251	RNA-binding protein 39. (505 aa)
	N306_06501	Splicing factor, suppressor of white-apricot. (926 aa)
	N306_12711	CUGBP Elav-like family member 4. (361 aa)
	N306_06272	Ribonucleoprotein PTB-binding 2. (607 aa)
	N306_12709	CUGBP Elav-like family member 4. (94 aa)
	N306_03498	Nuclear speckle splicing regulatory protein 1. (549 aa)
	N306_04522	Transformer-2 protein alpha. (258 aa)
	N306_06243	Noncompact myelin-associated protein. (102 aa)
	N306_07113	Muscleblind-like 2. (379 aa)
	N306_11752	WD40 repeat-containing protein SMU1. (513 aa)
	N306_10648	Methyltransferase-like 16. (512 aa)
	N306_00218	SNW domain-containing protein 1. (538 aa)
	N306_06885	Uncharacterized protein. (152 aa)
	N306_14531	Serine/arginine-rich splicing factor 3. (161 aa)
	N306_14520	Putative RNA-binding protein 15. (449 aa)
	N306_11564	Serine/arginine-rich splicing factor 7. (231 aa)
	N306_09966	Protein FAM172A. (416 aa)
	N306_01871	Cold-inducible RNA-binding protein. (167 aa)
	N306_05447	Protein SON. (460 aa)
	N306_08116	RNA-binding protein 25. (839 aa)
	N306_07770	YTH domain-containing protein 1. (695 aa)
	N306_15068	Fragile X mental retardation protein 1 B. (549 aa)
	N306_09653	Myoblast determination protein 1. (155 aa)
	N306_07342	Putative ATP-dependent RNA helicase DDX17; Belongs to the DEAD box helicase family. (495 aa)
	N306_13543	Heterogeneous nuclear ribonucleoprotein K. (450 aa)
	N306_11567	Serine/arginine-rich splicing factor 7. (241 aa)
	N306_11572	Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. (326 aa)
	N306_12536	Serine/arginine repetitive matrix protein 4. (545 aa)
	N306_11139	Protein quaking. (280 aa)
	N306_03339	KH domain-containing, RNA-binding, signal transduction-associated protein 1. (332 aa)
	N306_08895	Thyroid hormone receptor-associated protein 3. (968 aa)
	N306_15190	RNA-binding protein 5. (755 aa)

Your Current Organism:

Opisthocomus hoazin

NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N306_00218	N306_01871	A0A091VBM8	A0A091V5L1	SNW domain-containing protein 1.	Cold-inducible RNA-binding protein.	0.542
N306_00218	N306_03309	A0A091VBM8	A0A091XRK7	SNW domain-containing protein 1.	Transformer-2 protein beta.	0.542
N306_00218	N306_04522	A0A091VBM8	A0A091VSJ4	SNW domain-containing protein 1.	Transformer-2 protein alpha.	0.542
N306_00218	N306_06243	A0A091VBM8	A0A091VRA2	SNW domain-containing protein 1.	Noncompact myelin-associated protein.	0.697
N306_00218	N306_08895	A0A091VBM8	A0A091WBT9	SNW domain-containing protein 1.	Thyroid hormone receptor-associated protein 3.	0.460
N306_00218	N306_09928	A0A091VBM8	A0A091WMV7	SNW domain-containing protein 1.	La-related protein 7.	0.581
N306_00218	N306_11572	A0A091VBM8	A0A091W9W0	SNW domain-containing protein 1.	Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family.	0.845
N306_01001	N306_03309	A0A091XUT3	A0A091XRK7	Nuclear pore complex protein Nup98-Nup96.	Transformer-2 protein beta.	0.437
N306_01001	N306_04522	A0A091XUT3	A0A091VSJ4	Nuclear pore complex protein Nup98-Nup96.	Transformer-2 protein alpha.	0.408
N306_01001	N306_05447	A0A091XUT3	A0A091W2Q3	Nuclear pore complex protein Nup98-Nup96.	Protein SON.	0.509
N306_01001	N306_06243	A0A091XUT3	A0A091VRA2	Nuclear pore complex protein Nup98-Nup96.	Noncompact myelin-associated protein.	0.577
N306_01001	N306_07342	A0A091XUT3	A0A091W851	Nuclear pore complex protein Nup98-Nup96.	Putative ATP-dependent RNA helicase DDX17; Belongs to the DEAD box helicase family.	0.446
N306_01001	N306_08621	A0A091XUT3	A0A091WG29	Nuclear pore complex protein Nup98-Nup96.	Putative ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family.	0.446
N306_01001	N306_11572	A0A091XUT3	A0A091W9W0	Nuclear pore complex protein Nup98-Nup96.	Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family.	0.689
N306_01871	N306_00218	A0A091V5L1	A0A091VBM8	Cold-inducible RNA-binding protein.	SNW domain-containing protein 1.	0.542
N306_01871	N306_03309	A0A091V5L1	A0A091XRK7	Cold-inducible RNA-binding protein.	Transformer-2 protein beta.	0.685
N306_01871	N306_03442	A0A091V5L1	A0A091WIS3	Cold-inducible RNA-binding protein.	RNA-binding protein 6.	0.437
N306_01871	N306_04522	A0A091V5L1	A0A091VSJ4	Cold-inducible RNA-binding protein.	Transformer-2 protein alpha.	0.676
N306_01871	N306_06272	A0A091V5L1	A0A091VWL3	Cold-inducible RNA-binding protein.	Ribonucleoprotein PTB-binding 2.	0.425
N306_01871	N306_06453	A0A091V5L1	A0A091WJQ8	Cold-inducible RNA-binding protein.	RNA binding protein fox-1 2.	0.568