STRINGSTRING
N306_13835 N306_13835 N306_13577 N306_13577 N306_02129 N306_02129 N306_02835 N306_02835 N306_00925 N306_00925 N306_06190 N306_06190 N306_03565 N306_03565 N306_11756 N306_11756 N306_02959 N306_02959 N306_05834 N306_05834 N306_05046 N306_05046 N306_08695 N306_08695 N306_14189 N306_14189 N306_07489 N306_07489 N306_05639 N306_05639 N306_04621 N306_04621 N306_06871 N306_06871 N306_07637 N306_07637 N306_01711 N306_01711 N306_06276 N306_06276 N306_13958 N306_13958 N306_08069 N306_08069 N306_05132 N306_05132 N306_13734 N306_13734 N306_14824 N306_14824
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N306_13835RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (886 aa)
N306_13577Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (57 aa)
N306_02129AF4/FMR2 family member 4. (1160 aa)
N306_02835DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1154 aa)
N306_00925DNA-directed RNA polymerases I, II, and III subunit RPABC2. (95 aa)
N306_06190General transcription factor IIF subunit 2. (240 aa)
N306_03565Cyclin-T1. (388 aa)
N306_11756Nuclear cap-binding protein subunit 1. (754 aa)
N306_02959Protein AF-9. (510 aa)
N306_05834DNA-directed RNA polymerases I, II, and III subunit RPABC3. (102 aa)
N306_05046Negative elongation factor B. (545 aa)
N306_08695Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (108 aa)
N306_14189Cyclin-T2. (649 aa)
N306_07489ELL-associated factor 1. (210 aa)
N306_05639DNA-directed RNA polymerases I, II, and III subunit RPABC4. (55 aa)
N306_04621Cyclin-K; Belongs to the cyclin family. (587 aa)
N306_06871DNA-directed RNA polymerase II subunit RPB11-a. (90 aa)
N306_07637Negative elongation factor A. (508 aa)
N306_01711Negative elongation factor C/D. (561 aa)
N306_06276DNA-directed RNA polymerase II subunit RPB3. (248 aa)
N306_13958DNA-directed RNA polymerase II subunit RPB4. (118 aa)
N306_08069RNA polymerase-associated protein RTF1. (622 aa)
N306_05132DNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
N306_13734ELL-associated factor 2. (221 aa)
N306_14824Cyclin-dependent kinase 9. (341 aa)
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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