STRINGSTRING
N306_02835 N306_02835 N306_12398 N306_12398 N306_00925 N306_00925 N306_06190 N306_06190 N306_03565 N306_03565 N306_05046 N306_05046 N306_05834 N306_05834 N306_02267 N306_02267 N306_05227 N306_05227 N306_07513 N306_07513 N306_06015 N306_06015 N306_14189 N306_14189 N306_05639 N306_05639 N306_04621 N306_04621 N306_06871 N306_06871 N306_07127 N306_07127 N306_01316 N306_01316 N306_02520 N306_02520 N306_12153 N306_12153 N306_07637 N306_07637 N306_01711 N306_01711 N306_06276 N306_06276 N306_13958 N306_13958 N306_06530 N306_06530 N306_13835 N306_13835 N306_05132 N306_05132 N306_00329 N306_00329 N306_13158 N306_13158 N306_14824 N306_14824 N306_11180 N306_11180 N306_03843 N306_03843
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N306_02835DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1154 aa)
N306_12398Transcription elongation factor A protein 1. (267 aa)
N306_00925DNA-directed RNA polymerases I, II, and III subunit RPABC2. (95 aa)
N306_06190General transcription factor IIF subunit 2. (240 aa)
N306_03565Cyclin-T1. (388 aa)
N306_05046Negative elongation factor B. (545 aa)
N306_05834DNA-directed RNA polymerases I, II, and III subunit RPABC3. (102 aa)
N306_02267Transcription elongation factor B polypeptide 3. (754 aa)
N306_05227Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family. (112 aa)
N306_07513Transcription elongation factor A N-terminal and central domain-containing protein 2. (176 aa)
N306_06015Transcription elongation factor A N-terminal and central domain-containing protein. (360 aa)
N306_14189Cyclin-T2. (649 aa)
N306_05639DNA-directed RNA polymerases I, II, and III subunit RPABC4. (55 aa)
N306_04621Cyclin-K; Belongs to the cyclin family. (587 aa)
N306_06871DNA-directed RNA polymerase II subunit RPB11-a. (90 aa)
N306_07127Transcription elongation factor A protein 2. (278 aa)
N306_01316CDK-activating kinase assembly factor MAT1. (279 aa)
N306_02520Cyclin-H. (231 aa)
N306_12153General transcription factor IIH subunit 5. (59 aa)
N306_07637Negative elongation factor A. (508 aa)
N306_01711Negative elongation factor C/D. (561 aa)
N306_06276DNA-directed RNA polymerase II subunit RPB3. (248 aa)
N306_13958DNA-directed RNA polymerase II subunit RPB4. (118 aa)
N306_06530General transcription factor IIH subunit 3. (305 aa)
N306_13835RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (886 aa)
N306_05132DNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
N306_00329TFIIH basal transcription factor complex helicase XPB subunit. (705 aa)
N306_13158General transcription factor IIH subunit 2. (384 aa)
N306_14824Cyclin-dependent kinase 9. (341 aa)
N306_11180Cyclin-dependent kinase 7. (316 aa)
N306_03843Cyclin-dependent kinase 13. (1104 aa)
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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