STRINGSTRING
N306_00329 N306_00329 N306_06190 N306_06190 N306_00925 N306_00925 N306_02835 N306_02835 N306_13577 N306_13577 N306_11756 N306_11756 N306_05834 N306_05834 N306_08695 N306_08695 N306_09019 N306_09019 N306_11798 N306_11798 N306_05639 N306_05639 N306_06871 N306_06871 N306_01316 N306_01316 N306_13904 N306_13904 N306_02520 N306_02520 N306_12153 N306_12153 N306_06276 N306_06276 N306_13958 N306_13958 N306_06530 N306_06530 N306_05132 N306_05132 N306_13158 N306_13158 N306_11180 N306_11180
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N306_00329TFIIH basal transcription factor complex helicase XPB subunit. (705 aa)
N306_06190General transcription factor IIF subunit 2. (240 aa)
N306_00925DNA-directed RNA polymerases I, II, and III subunit RPABC2. (95 aa)
N306_02835DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1154 aa)
N306_13577Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (57 aa)
N306_11756Nuclear cap-binding protein subunit 1. (754 aa)
N306_05834DNA-directed RNA polymerases I, II, and III subunit RPABC3. (102 aa)
N306_08695Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (108 aa)
N306_09019mRNA cap guanine-N7 methyltransferase. (406 aa)
N306_11798mRNA-capping enzyme. (579 aa)
N306_05639DNA-directed RNA polymerases I, II, and III subunit RPABC4. (55 aa)
N306_06871DNA-directed RNA polymerase II subunit RPB11-a. (90 aa)
N306_01316CDK-activating kinase assembly factor MAT1. (279 aa)
N306_13904RNA/RNP complex-1-interacting phosphatase. (113 aa)
N306_02520Cyclin-H. (231 aa)
N306_12153General transcription factor IIH subunit 5. (59 aa)
N306_06276DNA-directed RNA polymerase II subunit RPB3. (248 aa)
N306_13958DNA-directed RNA polymerase II subunit RPB4. (118 aa)
N306_06530General transcription factor IIH subunit 3. (305 aa)
N306_05132DNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
N306_13158General transcription factor IIH subunit 2. (384 aa)
N306_11180Cyclin-dependent kinase 7. (316 aa)
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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