STRINGSTRING
N306_11972 N306_11972 N306_10700 N306_10700 N306_11695 N306_11695 N306_11153 N306_11153 N306_05797 N306_05797 N306_05791 N306_05791 N306_05750 N306_05750 N306_06344 N306_06344 N306_00379 N306_00379 N306_02797 N306_02797 N306_05796 N306_05796 N306_14780 N306_14780 N306_15190 N306_15190 N306_07980 N306_07980 N306_10089 N306_10089 N306_05507 N306_05507 N306_10088 N306_10088 N306_02188 N306_02188 N306_05482 N306_05482 N306_06335 N306_06335 N306_06614 N306_06614 N306_07381 N306_07381 N306_01048 N306_01048 N306_04908 N306_04908 LSM3 LSM3 N306_07405 N306_07405 N306_07378 N306_07378 N306_03997 N306_03997 N306_15101 N306_15101 N306_15094 N306_15094 N306_02055 N306_02055 N306_13284 N306_13284 N306_08116 N306_08116 N306_04072 N306_04072 N306_05437 N306_05437 N306_03711 N306_03711 N306_10679 N306_10679 N306_11775 N306_11775 N306_00128 N306_00128 N306_13597 N306_13597 N306_15121 N306_15121 N306_03498 N306_03498 N306_11936 N306_11936 N306_04522 N306_04522 N306_08156 N306_08156 N306_06243 N306_06243 N306_07676 N306_07676 N306_03901 N306_03901 N306_01563 N306_01563 N306_05927 N306_05927 N306_02680 N306_02680 N306_03460 N306_03460 N306_03455 N306_03455 N306_08414 N306_08414 N306_08388 N306_08388 N306_05702 N306_05702 N306_08363 N306_08363 N306_11752 N306_11752 N306_05599 N306_05599 N306_05600 N306_05600 N306_01332 N306_01332 N306_02363 N306_02363 N306_04813 N306_04813 N306_03408 N306_03408 N306_00157 N306_00157 N306_08527 N306_08527 N306_11169 N306_11169 N306_06875 N306_06875 N306_06886 N306_06886 N306_05257 N306_05257 N306_00576 N306_00576 N306_07959 N306_07959 N306_13466 N306_13466 N306_01871 N306_01871 N306_03536 N306_03536 N306_00570 N306_00570 N306_09198 N306_09198 N306_01575 N306_01575 N306_14004 N306_14004 N306_04635 N306_04635 N306_10988 N306_10988 N306_03722 N306_03722 N306_08143 N306_08143 N306_02933 N306_02933 N306_03012 N306_03012 N306_00418 N306_00418 N306_06790 N306_06790 N306_07525 N306_07525 N306_07536 N306_07536 N306_13603 N306_13603 N306_06791 N306_06791 N306_14490 N306_14490 N306_11688 N306_11688 N306_03442 N306_03442 N306_05066 N306_05066 N306_04280 N306_04280 N306_03295 N306_03295 N306_06390 N306_06390 N306_08695 N306_08695 N306_12379 N306_12379 N306_11392 N306_11392 N306_08657 N306_08657 N306_06215 N306_06215 N306_05253 N306_05253 N306_13577 N306_13577 N306_07756 N306_07756 LSM8 LSM8 N306_02019 N306_02019 N306_15471 N306_15471 LSM5 LSM5 N306_15578 N306_15578 N306_05084 N306_05084 N306_11531 N306_11531 N306_13746 N306_13746 N306_08006 N306_08006 N306_06238 N306_06238 N306_14058 N306_14058
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N306_11972Pre-mRNA-splicing factor RBM22. (402 aa)
N306_10700Pre-mRNA-splicing factor SPF27. (132 aa)
N306_11695Smad nuclear-interacting protein 1. (285 aa)
N306_11153Polypyrimidine tract-binding protein 3. (507 aa)
N306_05797GC-rich sequence DNA-binding factor 2. (565 aa)
N306_05791Pre-mRNA branch site protein p14. (115 aa)
N306_05750Protein SDE2. (196 aa)
N306_06344Cell division cycle 5-like. (789 aa)
N306_00379Tumor protein p63-regulated gene 1-like. (177 aa)
N306_02797Pleiotropic regulator 1. (513 aa)
N306_05796GC-rich sequence DNA-binding factor 2. (170 aa)
N306_14780Uncharacterized protein C9orf78. (258 aa)
N306_15190RNA-binding protein 5. (755 aa)
N306_07980Dynein assembly factor with WDR repeat domains 1. (410 aa)
N306_10089Heterogeneous nuclear ribonucleoprotein M. (670 aa)
N306_05507Calcium-regulated heat stable protein 1. (152 aa)
N306_10088Coiled-coil domain-containing protein 94. (181 aa)
N306_02188Heterogeneous nuclear ribonucleoprotein Q. (426 aa)
N306_05482Putative RNA-binding protein Luc7-like 1. (350 aa)
N306_06335RNA-binding protein Raly. (260 aa)
N306_06614U1 small nuclear ribonucleoprotein 70 kDa. (51 aa)
N306_07381Cold shock domain-containing protein C2. (146 aa)
N306_01048Splicing factor 3A subunit 2. (205 aa)
N306_04908Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32. (751 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
N306_07405Putative RNA-binding protein Luc7-like 2. (378 aa)
N306_07378PHD finger-like domain-containing protein 5A. (105 aa)
N306_03997Pre-mRNA-splicing factor CWC22. (873 aa)
N306_15101NF-kappa-B-activating protein. (248 aa)
N306_15094UPF0428 protein CXorf56. (125 aa)
N306_02055U6 snRNA-associated Sm-like LSm4. (91 aa)
N306_13284Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15. (742 aa)
N306_08116RNA-binding protein 25. (839 aa)
N306_04072Peptidyl-prolyl cis-trans isomerase G. (750 aa)
N306_05437PAX3-and PAX7-binding protein 1. (805 aa)
N306_03711Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (462 aa)
N306_10679U1 small nuclear ribonucleoprotein C. (142 aa)
N306_11775DnaJ subfamily C member 8. (228 aa)
N306_00128Spliceosome-associated protein CWC15. (223 aa)
N306_13597Pre-mRNA-splicing factor CWC25. (416 aa)
N306_15121Serine/threonine-protein kinase PRP4. (992 aa)
N306_03498Nuclear speckle splicing regulatory protein 1. (549 aa)
N306_11936Heterogeneous nuclear ribonucleoprotein A/B. (263 aa)
N306_04522Transformer-2 protein alpha. (258 aa)
N306_08156Proline-rich protein PRCC. (359 aa)
N306_06243Noncompact myelin-associated protein. (102 aa)
N306_07676NK-tumor recognition protein. (1450 aa)
N306_03901U2 small nuclear ribonucleoprotein A. (212 aa)
N306_01563Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (161 aa)
N306_05927G patch domain-containing protein 1. (903 aa)
N306_02680Uncharacterized protein. (123 aa)
N306_03460Cell division cycle and apoptosis regulator protein 1. (1114 aa)
N306_03455Heterogeneous nuclear ribonucleoprotein H3. (343 aa)
N306_08414RING finger protein 113A. (288 aa)
N306_08388ATP-dependent RNA helicase DHX8. (598 aa)
N306_05702Splicing factor 3A subunit 1. (779 aa)
N306_08363Poly(RC)-binding protein 3. (306 aa)
N306_11752WD40 repeat-containing protein SMU1. (513 aa)
N306_05599SURP and G-patch domain-containing protein 1. (615 aa)
N306_05600Transmembrane 6 superfamily member 2. (190 aa)
N306_01332Pre-mRNA-splicing factor SLU7. (581 aa)
N306_02363Serine/arginine-rich splicing factor 4. (446 aa)
N306_04813Splicing factor 45. (401 aa)
N306_03408Survival of motor neuron-related-splicing factor 30. (238 aa)
N306_00157Pinin. (634 aa)
N306_08527Peptidyl-prolyl cis-trans isomerase-like 2. (479 aa)
N306_11169Splicing regulatory glutamine/lysine-rich protein 1. (519 aa)
N306_06875PRKR-interacting protein 1. (148 aa)
N306_06886Putative ATP-dependent RNA helicase DHX33. (612 aa)
N306_05257Beta-catenin-like 1. (564 aa)
N306_00576Calcium homeostasis endoplasmic reticulum protein. (834 aa)
N306_07959U2 snRNP-associated SURP motif-containing protein. (973 aa)
N306_13466Poly(RC)-binding protein 3. (341 aa)
N306_01871Cold-inducible RNA-binding protein. (167 aa)
N306_03536U5 small nuclear ribonucleoprotein 200 kDa helicase. (124 aa)
N306_00570Protein FAM32A. (88 aa)
N306_09198Splicing factor U2AF 35 kDa subunit. (178 aa)
N306_01575Zinc finger matrin-type protein 2. (193 aa)
N306_14004U6 snRNA-associated Sm-like LSm7. (101 aa)
N306_04635WD repeat-containing protein 25. (327 aa)
N306_10988Protein lin-28 B. (229 aa)
N306_03722Uncharacterized protein. (88 aa)
N306_08143Serine/arginine-rich splicing factor 6. (265 aa)
N306_02933Polypyrimidine tract-binding protein 2. (386 aa)
N306_03012Tuftelin-interacting protein 11. (761 aa)
N306_00418CWF19-like 2. (162 aa)
N306_06790ATP-dependent RNA helicase A. (359 aa)
N306_07525Protein mago nashi 2. (98 aa)
N306_07536Pre-mRNA-splicing factor 38A. (250 aa)
N306_13603U2 small nuclear ribonucleoprotein B. (226 aa)
N306_06791ATP-dependent RNA helicase A. (813 aa)
N306_14490Crooked neck-like 1. (682 aa)
N306_11688Splicing factor 3A subunit 3. (435 aa)
N306_03442RNA-binding protein 6. (1096 aa)
N306_05066U4/U6 small nuclear ribonucleoprotein Prp4. (444 aa)
N306_04280WW domain-binding protein 11. (650 aa)
N306_03295WD repeat-containing protein 53. (354 aa)
N306_06390Protein BUD31. (144 aa)
N306_08695Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (108 aa)
N306_12379Luc7-like 3. (399 aa)
N306_11392PCNA-interacting partner. (588 aa)
N306_08657HIV Tat-specific factor 1. (395 aa)
N306_06215WW domain-binding protein 4. (403 aa)
N306_05253SURP and G-patch domain-containing protein 2. (1100 aa)
N306_13577Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (57 aa)
N306_07756Putative ATP-dependent RNA helicase DHX35. (690 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (88 aa)
N306_02019U6 snRNA-associated Sm-like LSm6. (80 aa)
N306_15471WD repeat-containing protein 70. (623 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (76 aa)
N306_15578Peptidylprolyl isomerase domain and WD repeat-containing protein 1. (581 aa)
N306_05084U4/U6 small nuclear ribonucleoprotein Prp3. (689 aa)
N306_11531Pre-mRNA-splicing factor 18. (320 aa)
N306_13746Poly(U)-binding-splicing factor PUF60. (286 aa)
N306_08006RNA-binding Raly-like. (205 aa)
N306_06238Pre-mRNA-splicing factor syf2. (199 aa)
N306_14058Nuclease-sensitive element-binding protein 1. (248 aa)
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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