STRINGSTRING
N306_10754 N306_10754 N306_03960 N306_03960 N306_01332 N306_01332 N306_02363 N306_02363 N306_10764 N306_10764 N306_00076 N306_00076 N306_13957 N306_13957 N306_11982 N306_11982 N306_15099 N306_15099 N306_01693 N306_01693 N306_13085 N306_13085 N306_07402 N306_07402 N306_00252 N306_00252 N306_11169 N306_11169 N306_14531 N306_14531 N306_11564 N306_11564 N306_02654 N306_02654 N306_08195 N306_08195 N306_11567 N306_11567 N306_11572 N306_11572 N306_07174 N306_07174 N306_04614 N306_04614 N306_04963 N306_04963 N306_08143 N306_08143 N306_07235 N306_07235 N306_07525 N306_07525 N306_00504 N306_00504 N306_08695 N306_08695 N306_06089 N306_06089 N306_11756 N306_11756 N306_06745 N306_06745 N306_02219 N306_02219 N306_13577 N306_13577 N306_03573 N306_03573 N306_04833 N306_04833 N306_04368 N306_04368 N306_09198 N306_09198 N306_04668 N306_04668 N306_04576 N306_04576 N306_08591 N306_08591 N306_05999 N306_05999 N306_14387 N306_14387
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N306_10754Serine/arginine-rich splicing factor 5. (264 aa)
N306_03960UAP56-interacting factor. (273 aa)
N306_01332Pre-mRNA-splicing factor SLU7. (581 aa)
N306_02363Serine/arginine-rich splicing factor 4. (446 aa)
N306_10764Serine/arginine-rich splicing factor 4. (256 aa)
N306_00076Pre-mRNA cleavage complex 2 protein Pcf11. (1479 aa)
N306_13957Pre-mRNA 3' end processing protein WDR33. (1330 aa)
N306_11982Zinc finger CCCH domain-containing protein 11A. (739 aa)
N306_15099Regulator of nonsense transcripts 3B. (351 aa)
N306_01693Cleavage stimulation factor subunit 1. (431 aa)
N306_13085Pre-mRNA-processing factor 17. (521 aa)
N306_07402Polymerase delta-interacting protein 3. (397 aa)
N306_00252Chromatin target of PRMT1 protein. (235 aa)
N306_11169Splicing regulatory glutamine/lysine-rich protein 1. (519 aa)
N306_14531Serine/arginine-rich splicing factor 3. (161 aa)
N306_11564Serine/arginine-rich splicing factor 7. (231 aa)
N306_02654THO complex subunit 4. (148 aa)
N306_08195Regulator of nonsense transcripts 3A. (409 aa)
N306_11567Serine/arginine-rich splicing factor 7. (241 aa)
N306_11572Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. (326 aa)
N306_07174THO complex subunit 7. (158 aa)
N306_04614Poly(A) polymerase alpha. (735 aa)
N306_04963THO complex subunit 5. (586 aa)
N306_08143Serine/arginine-rich splicing factor 6. (265 aa)
N306_07235RNA-binding protein with serine-rich domain 1. (243 aa)
N306_07525Protein mago nashi 2. (98 aa)
N306_00504Pre-mRNA 3'-end-processing factor FIP1. (481 aa)
N306_08695Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (108 aa)
N306_06089Cleavage and polyadenylation specificity factor subunit 3. (666 aa)
N306_11756Nuclear cap-binding protein subunit 1. (754 aa)
N306_06745Pre-mRNA 3'-end-processing factor FIP1. (487 aa)
N306_02219Polyribonucleotide 5'-hydroxyl-kinase Clp1. (224 aa)
N306_13577Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (57 aa)
N306_03573THO complex subunit 3. (209 aa)
N306_04833THO complex subunit 1. (615 aa)
N306_04368Cleavage and polyadenylation specificity factor subunit 6. (447 aa)
N306_09198Splicing factor U2AF 35 kDa subunit. (178 aa)
N306_04668Cleavage and polyadenylation specificity factor subunit 4. (261 aa)
N306_04576Cleavage and polyadenylation specificity factor subunit 2. (782 aa)
N306_08591Cleavage stimulation factor subunit 3. (708 aa)
N306_05999Protein CASC3. (480 aa)
N306_14387Cleavage and polyadenylation specificity factor subunit 5. (181 aa)
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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