51 items (Opisthocomus hoazin) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N306_15470	Nuclear pore complex protein Nup155. (1352 aa)
	N306_08195	Regulator of nonsense transcripts 3A. (409 aa)
	N306_08201	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (162 aa)
	N306_02654	THO complex subunit 4. (148 aa)
	N306_08203	E3 SUMO-protein ligase RanBP2. (155 aa)
	N306_14794	Nucleoporin NUP188. (1728 aa)
	N306_08202	E3 SUMO-protein ligase RanBP2. (160 aa)
	N306_11169	Splicing regulatory glutamine/lysine-rich protein 1. (519 aa)
	N306_01332	Pre-mRNA-splicing factor SLU7. (581 aa)
	N306_11393	Nucleoporin Nup37. (326 aa)
	N306_07086	NTF2-related export protein 2. (142 aa)
	N306_00802	Nucleoprotein TPR. (2362 aa)
	N306_04528	Uncharacterized protein. (212 aa)
	N306_04518	Nucleoporin-like 2. (379 aa)
	N306_13957	Pre-mRNA 3' end processing protein WDR33. (1330 aa)
	N306_01699	mRNA export factor. (368 aa)
	N306_11982	Zinc finger CCCH domain-containing protein 11A. (739 aa)
	N306_03707	Nucleoporin Nup43. (335 aa)
	N306_15099	Regulator of nonsense transcripts 3B. (351 aa)
	N306_07402	Polymerase delta-interacting protein 3. (397 aa)
	N306_07628	Histone RNA hairpin-binding protein. (216 aa)
	N306_13376	Nuclear pore complex protein Nup54. (483 aa)
	N306_00252	Chromatin target of PRMT1 protein. (235 aa)
	N306_01461	Uncharacterized protein C20orf196. (208 aa)
	N306_11572	Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. (326 aa)
	N306_02865	Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family. (211 aa)
	N306_04963	THO complex subunit 5. (586 aa)
	N306_06883	Nuclear pore complex protein Nup88. (644 aa)
	N306_14808	Nucleoporin GLE1. (671 aa)
	N306_05727	Ankyrin repeat domain-containing protein 9. (272 aa)
	N306_12014	Nuclear pore complex protein Nup133. (1091 aa)
	N306_07235	RNA-binding protein with serine-rich domain 1. (243 aa)
	N306_07525	Protein mago nashi 2. (98 aa)
	N306_09013	Nucleoporin SEH1; Belongs to the WD repeat SEC13 family. (382 aa)
	N306_14383	Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (805 aa)
	N306_07520	Nucleoporin NDC1. (620 aa)
	N306_14293	Nuclear pore complex protein Nup50. (470 aa)
	N306_04265	Nuclear pore complex protein Nup205. (2005 aa)
	N306_01064	Protein SEC13; Belongs to the WD repeat SEC13 family. (304 aa)
	N306_08695	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (108 aa)
	N306_11756	Nuclear cap-binding protein subunit 1. (754 aa)
	N306_12329	Nucleoporin NUP53. (314 aa)
	N306_13577	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (57 aa)
	N306_09198	Splicing factor U2AF 35 kDa subunit. (178 aa)
	N306_15045	Nuclear pore glycoprotein p62. (457 aa)
	N306_07629	Histone RNA hairpin-binding protein. (191 aa)
	N306_05999	Protein CASC3. (480 aa)
	N306_13761	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (612 aa)
	N306_08263	Nuclear pore membrane glycoprotein 210. (1831 aa)
	N306_01001	Nuclear pore complex protein Nup98-Nup96. (1703 aa)
	N306_09146	Nucleoporin p58/p45. (563 aa)

Your Current Organism:

Opisthocomus hoazin

NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N306_00252	N306_02654	A0A091W780	A0A091V6L6	Chromatin target of PRMT1 protein.	THO complex subunit 4.	0.826
N306_00252	N306_04963	A0A091W780	A0A091WB60	Chromatin target of PRMT1 protein.	THO complex subunit 5.	0.812
N306_00252	N306_05999	A0A091W780	A0A091XIZ9	Chromatin target of PRMT1 protein.	Protein CASC3.	0.547
N306_00252	N306_07235	A0A091W780	A0A091WFU4	Chromatin target of PRMT1 protein.	RNA-binding protein with serine-rich domain 1.	0.587
N306_00252	N306_07402	A0A091W780	A0A091W6G4	Chromatin target of PRMT1 protein.	Polymerase delta-interacting protein 3.	0.818
N306_00252	N306_07525	A0A091W780	A0A091WGX7	Chromatin target of PRMT1 protein.	Protein mago nashi 2.	0.703
N306_00252	N306_08695	A0A091W780	A0A091WKL9	Chromatin target of PRMT1 protein.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.497
N306_00252	N306_09198	A0A091W780	A0A091X4R6	Chromatin target of PRMT1 protein.	Splicing factor U2AF 35 kDa subunit.	0.519
N306_00252	N306_11572	A0A091W780	A0A091W9W0	Chromatin target of PRMT1 protein.	Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family.	0.728
N306_00252	N306_11756	A0A091W780	A0A091WMS4	Chromatin target of PRMT1 protein.	Nuclear cap-binding protein subunit 1.	0.465
N306_00252	N306_11982	A0A091W780	A0A091W476	Chromatin target of PRMT1 protein.	Zinc finger CCCH domain-containing protein 11A.	0.707
N306_00252	N306_13577	A0A091W780	A0A091WPL3	Chromatin target of PRMT1 protein.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.497
N306_00802	N306_01001	A0A091VR63	A0A091XUT3	Nucleoprotein TPR.	Nuclear pore complex protein Nup98-Nup96.	0.981
N306_00802	N306_01064	A0A091VR63	A0A091WJF7	Nucleoprotein TPR.	Protein SEC13; Belongs to the WD repeat SEC13 family.	0.909
N306_00802	N306_01699	A0A091VR63	A0A091W3U5	Nucleoprotein TPR.	mRNA export factor.	0.954
N306_00802	N306_02654	A0A091VR63	A0A091V6L6	Nucleoprotein TPR.	THO complex subunit 4.	0.857
N306_00802	N306_02865	A0A091VR63	A0A091WAW7	Nucleoprotein TPR.	Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.	0.610
N306_00802	N306_03707	A0A091VR63	A0A091W4L8	Nucleoprotein TPR.	Nucleoporin Nup43.	0.745
N306_00802	N306_04265	A0A091VR63	A0A091WJ13	Nucleoprotein TPR.	Nuclear pore complex protein Nup205.	0.922
N306_00802	N306_04518	A0A091VR63	A0A091VV05	Nucleoprotein TPR.	Nucleoporin-like 2.	0.723