STRINGSTRING
N306_12279 N306_12279 N306_01316 N306_01316 N306_02520 N306_02520 N306_12153 N306_12153 N306_13356 N306_13356 N306_02199 N306_02199 N306_15034 N306_15034 N306_06276 N306_06276 N306_13958 N306_13958 N306_06530 N306_06530 N306_14928 N306_14928 N306_05132 N306_05132 N306_05936 N306_05936 N306_03093 N306_03093 N306_00329 N306_00329 N306_13158 N306_13158 N306_04824 N306_04824 N306_03378 N306_03378 N306_11180 N306_11180 N306_12801 N306_12801 N306_06190 N306_06190 N306_10870 N306_10870 N306_00925 N306_00925 N306_02835 N306_02835 N306_10730 N306_10730 N306_15237 N306_15237 N306_02723 N306_02723 N306_05834 N306_05834 N306_08709 N306_08709 N306_00543 N306_00543 N306_05160 N306_05160 N306_10651 N306_10651 N306_09898 N306_09898 N306_05639 N306_05639 N306_12016 N306_12016 N306_02528 N306_02528 N306_06871 N306_06871
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N306_12279Transcription initiation factor TFIID subunit 4B. (648 aa)
N306_01316CDK-activating kinase assembly factor MAT1. (279 aa)
N306_02520Cyclin-H. (231 aa)
N306_12153General transcription factor IIH subunit 5. (59 aa)
N306_13356Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (291 aa)
N306_02199TATA-box-binding protein. (304 aa)
N306_15034Transcription initiation factor TFIID subunit 7. (331 aa)
N306_06276DNA-directed RNA polymerase II subunit RPB3. (248 aa)
N306_13958DNA-directed RNA polymerase II subunit RPB4. (118 aa)
N306_06530General transcription factor IIH subunit 3. (305 aa)
N306_14928TATA box-binding protein-like 1. (183 aa)
N306_05132DNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
N306_05936Transcription initiation factor TFIID subunit 4. (259 aa)
N306_03093Transcription initiation factor IIB. (310 aa)
N306_00329TFIIH basal transcription factor complex helicase XPB subunit. (705 aa)
N306_13158General transcription factor IIH subunit 2. (384 aa)
N306_04824Transcription initiation factor TFIID subunit 3. (872 aa)
N306_03378Transcription initiation factor TFIID subunit 5. (622 aa)
N306_11180Cyclin-dependent kinase 7. (316 aa)
N306_12801Sperm-associated antigen 16 protein. (143 aa)
N306_06190General transcription factor IIF subunit 2. (240 aa)
N306_10870Transcription initiation factor IIA subunit 1. (368 aa)
N306_00925DNA-directed RNA polymerases I, II, and III subunit RPABC2. (95 aa)
N306_02835DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1154 aa)
N306_10730Microtubule-associated protein 1A. (156 aa)
N306_15237Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
N306_02723Transcription initiation factor TFIID subunit 12. (160 aa)
N306_05834DNA-directed RNA polymerases I, II, and III subunit RPABC3. (102 aa)
N306_08709Transcription initiation factor TFIID subunit 1. (1859 aa)
N306_00543General transcription factor IIE subunit 1. (418 aa)
N306_05160TATA-box-binding protein. (194 aa)
N306_10651General transcription factor IIE subunit 1. (442 aa)
N306_09898Transcription initiation factor TFIID subunit 13. (96 aa)
N306_05639DNA-directed RNA polymerases I, II, and III subunit RPABC4. (55 aa)
N306_12016TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L. (589 aa)
N306_02528Transcription initiation factor TFIID subunit 2. (888 aa)
N306_06871DNA-directed RNA polymerase II subunit RPB11-a. (90 aa)
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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