STRINGSTRING
N306_11766 N306_11766 N306_04499 N306_04499 N306_14928 N306_14928 N306_10443 N306_10443 N306_06530 N306_06530 N306_00115 N306_00115 N306_11649 N306_11649 N306_08911 N306_08911 N306_07617 N306_07617 N306_14008 N306_14008 N306_02199 N306_02199 N306_12153 N306_12153 N306_02520 N306_02520 N306_01316 N306_01316 N306_05541 N306_05541 N306_03524 N306_03524 N306_02876 N306_02876 N306_05639 N306_05639 N306_12836 N306_12836 N306_05773 N306_05773 N306_01424 N306_01424 N306_12859 N306_12859 N306_05160 N306_05160 N306_04282 N306_04282 N306_05597 N306_05597 N306_06039 N306_06039 N306_05834 N306_05834 N306_13023 N306_13023 N306_07507 N306_07507 N306_06093 N306_06093 N306_09792 N306_09792 N306_10730 N306_10730 N306_11521 N306_11521 N306_08008 N306_08008 N306_00805 N306_00805 N306_00925 N306_00925 N306_08712 N306_08712 N306_05820 N306_05820 N306_05825 N306_05825 N306_05821 N306_05821 N306_11712 N306_11712 N306_11180 N306_11180 N306_14755 N306_14755 N306_13158 N306_13158 N306_00329 N306_00329 N306_08205 N306_08205 N306_00806 N306_00806 N306_00808 N306_00808 N306_05574 N306_05574 N306_08010 N306_08010 N306_05132 N306_05132 N306_00804 N306_00804 N306_14250 N306_14250
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N306_11766Histone H2B; Belongs to the histone H2B family. (126 aa)
N306_04499DNA-directed RNA polymerase I subunit RPA43. (248 aa)
N306_14928TATA box-binding protein-like 1. (183 aa)
N306_10443Histone H2A; Belongs to the histone H2A family. (85 aa)
N306_06530General transcription factor IIH subunit 3. (305 aa)
N306_00115TATA box-binding protein-associated factor RNA polymerase I subunit D. (199 aa)
N306_11649Metastasis-associated protein MTA3. (591 aa)
N306_08911DNA-directed RNA polymerases I and III subunit RPAC1. (264 aa)
N306_07617DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1676 aa)
N306_14008Methyl-CpG-binding domain protein 3. (253 aa)
N306_02199TATA-box-binding protein. (304 aa)
N306_12153General transcription factor IIH subunit 5. (59 aa)
N306_02520Cyclin-H. (231 aa)
N306_01316CDK-activating kinase assembly factor MAT1. (279 aa)
N306_05541RNA polymerase I-specific transcription initiation factor RRN3. (583 aa)
N306_03524DNA-directed RNA polymerase I subunit RPA49. (381 aa)
N306_02876Histone H2A; Belongs to the histone H2A family. (127 aa)
N306_05639DNA-directed RNA polymerases I, II, and III subunit RPABC4. (55 aa)
N306_12836Histone H2B.3; Belongs to the histone H2B family. (72 aa)
N306_05773TATA box-binding protein-associated factor RNA polymerase I subunit A. (412 aa)
N306_01424Metastasis-associated protein MTA1. (715 aa)
N306_12859DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1019 aa)
N306_05160TATA-box-binding protein. (194 aa)
N306_04282Histone H2B 1/2/3/4/6; Belongs to the histone H2B family. (126 aa)
N306_05597Transcriptional repressor p66-alpha. (615 aa)
N306_06039Histone-binding protein RBBP7. (378 aa)
N306_05834DNA-directed RNA polymerases I, II, and III subunit RPABC3. (102 aa)
N306_13023Chromobox protein 3. (176 aa)
N306_07507Nucleolar transcription factor 1. (393 aa)
N306_06093TATA box-binding protein-associated factor RNA polymerase I subunit B. (573 aa)
N306_09792Transcriptional repressor p66-beta. (460 aa)
N306_10730Microtubule-associated protein 1A. (156 aa)
N306_11521Cyclin-D-binding Myb-like transcription factor 1. (767 aa)
N306_08008Histone H3.2. (83 aa)
N306_00805Histone H2A; Belongs to the histone H2A family. (129 aa)
N306_00925DNA-directed RNA polymerases I, II, and III subunit RPABC2. (95 aa)
N306_08712Acidic repeat-containing protein. (218 aa)
N306_05820Histone H2A; Belongs to the histone H2A family. (95 aa)
N306_05825Histone H2B; Belongs to the histone H2B family. (126 aa)
N306_05821Histone H2A; Belongs to the histone H2A family. (93 aa)
N306_11712Chromodomain-helicase-DNA-binding protein 4. (1881 aa)
N306_11180Cyclin-dependent kinase 7. (316 aa)
N306_14755Transcription termination factor 1. (347 aa)
N306_13158General transcription factor IIH subunit 2. (384 aa)
N306_00329TFIIH basal transcription factor complex helicase XPB subunit. (705 aa)
N306_08205Methyl-CpG-binding domain protein 2. (190 aa)
N306_00806Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (102 aa)
N306_00808Histone H2B; Belongs to the histone H2B family. (126 aa)
N306_05574Histone-binding protein RBBP4. (430 aa)
N306_08010Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (80 aa)
N306_05132DNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
N306_00804Histone H2B 7; Belongs to the histone H2B family. (126 aa)
N306_14250Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (120 aa)
Your Current Organism:
Opisthocomus hoazin
NCBI taxonomy Id: 30419
Other names: O. hoazin, Opisthocomus hoazin hoazin, hoatzin
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